(Q44312015)

1 December 2017

title

Topological measurement of an A-tract bend angle: comparison of the bent and straightened states (English)

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1 December 2017

4

Janusz Bujnicki

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1 December 2017

2

Monika Radlinska

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1 December 2017

Vladimir Tchernaenko

1

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1 December 2017

Christopher Drabik

series ordinal

3

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1 December 2017

Herbert R Halvorson

series ordinal

5

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1 December 2017

Leonard C Lutter

series ordinal

6

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1 December 2017

language of work or name

English

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publication date

1 February 2003

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Journal of Molecular Biology

1 December 2017

published in

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1 December 2017

volume

326

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1 December 2017

issue

3

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1 December 2017

page(s)

737-749

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What is the basis of sequence-directed curvature in DNAs containing A tracts?

1 December 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Studies of DNA bending and flexibility using gel electrophoresis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Straightening out the bends in curved DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Sequence-directed curvature of DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Comparative gel electrophoresis measurement of the DNA bend angle induced by the catabolite activator protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Wrapping of DNA around the E.coli RNA polymerase open promoter complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Fos and Jun do not bend the AP-1 recognition site

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Molecular characterization of the GCN4-DNA complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Fos-Jun heterodimers and Jun homodimers bend DNA in opposite orientations: implications for transcription factor cooperativity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

DNA bending by Fos and Jun: the flexible hinge model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Fos and Jun bend the AP-1 site: effects of probe geometry on the detection of protein-induced DNA bending

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Comparison of DNA Bending by Fos−Jun and Phased A Tracts by Multifactorial Phasing Analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

DNA bending by asymmetric phosphate neutralization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Evidence for DNA bending at the T7 RNA polymerase promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Nucleosome mobility and the maintenance of nucleosome positioning

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Functional replacement of a protein-induced bend in a DNA recombination site

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Deformation of DNA during site-specific recombination of bacteriophage lambda: replacement of IHF protein by HU protein or sequence-directed bends

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

The intrinsic curvature of DNA in solution.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Thermodynamics and premelting conformational changes of phased (dA)5 tracts.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Determination of the extent of DNA bending by an adenine-thymine tract

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Curved DNA: design, synthesis, and circularization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Topological measurement of protein-induced DNA bend angles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Determination of the number of superhelical turns in simian virus 40 DNA by gel electrophoresis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Measurement of the linking number change in transcribing chromatin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

DNA structural variations in the E. coli tyrT promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Measurement of the DNA bend angle induced by the catabolite activator protein using Monte Carlo simulation of cyclization kinetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Conformational fluctuations of DNA helix

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Energetics of DNA twisting. II. Topoisomer analysis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Torsional rigidity of DNA and length dependence of the free energy of DNA supercoiling

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Theory of twisting and bending of chain macromolecules; analysis of the fluorescence depolarization of DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Helical repeat of DNA in solution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Helical periodicity of DNA determined by enzyme digestion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Sequence-dependent helical periodicity of DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Helical repeat and chirality effects on DNA gel electrophoretic mobility

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Temperature and salt dependence of the gel migration anomaly of curved DNA fragments

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

On the sequence determinants and flexibility of the kinetoplast DNA fragment with abnormal gel electrophoretic mobilities

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Application of the method of phage T4 DNA ligase-catalyzed ring-closure to the study of DNA structure. I. Computational analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Sequence Elements Responsible for DNA Curvature

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Global features of DNA structure by comparative gel electrophoresis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Solution structure of an A-tract DNA bend

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Experimental evaluation of the Liu-Beveridge dinucleotide step model of DNA structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

A refined prediction method for gel retardation of DNA oligonucleotides from dinucleotide step parameters: reconciliation of DNA bending models with crystal structure data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

DNA bending by the bulge defect

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Design and calibration of a semi-synthetic DNA phasing assay

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Improved quantitation of DNA curvature using ligation ladders.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

The major adduct of the antitumor drug cis-diamminedichloroplatinum(II) with DNA bends the duplex by approximately equal to 40 degrees toward the major groove

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

DNA-binding domains of Fos and Jun do not induce DNA curvature: an investigation with solution and gel methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Physiological concentration of magnesium ions induces a strong macroscopic curvature in GGGCCC-containing DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Generating tandem repeats by cloning with double initiator fragments

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Cloning multiple copies of a DNA segment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Thermal unwinding of simian virus 40 transcription complex DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Effects of histone acetylation on chromatin topology in vivo

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Enhancer-activated plasmid transcription complexes contain constrained supercoiling

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

Simplification of DNA topology below equilibrium values by type II topoisomerases

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

DNA topoisomerase V is a relative of eukaryotic topoisomerase I from a hyperthermophilic prokaryote

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2901468-7

10.1016/S0022-2836(02)01468-7

7 January 2021

Identifiers

DOI

1 reference

1 December 2017

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