(Q44590118)

4 December 2017

title

Proton affinity changes driving unidirectional proton transport in the bacteriorhodopsin photocycle (English)

1 reference

4 December 2017

Proton Affinity Changes Driving Unidirectional Proton Transport in the Bacteriorhodopsin Photocycle (English)

1 reference

https://api.crossref.org/works/10.1016/S0022-2836(03)00903-3

11 March 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14499620

11 March 2024

1 reference

https://api.crossref.org/works/10.1016/S0022-2836(03)00903-3

11 March 2024

1

Alexey Onufriev

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14499620

11 March 2024

author name string

Alexander Smondyrev

series ordinal

2

1 reference

4 December 2017

Donald Bashford

series ordinal

3

1 reference

4 December 2017

language of work or name

English

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publication date

1 October 2003

1 reference

4 December 2017

3 October 2003

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=14499620

full work available at URL

11 March 2024

http://people.cs.vt.edu/~onufriev/PUBLICATIONS/br.published.pdf

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14499620

https://api.elsevier.com/content/article/PII:S0022283603009033?httpAccept=text/xml

11 March 2024

1 reference

https://api.crossref.org/works/10.1016/S0022-2836(03)00903-3

https://api.elsevier.com/content/article/PII:S0022283603009033?httpAccept=text/plain

11 March 2024

1 reference

https://api.crossref.org/works/10.1016/S0022-2836(03)00903-3

Journal of Molecular Biology

11 March 2024

published in

1 reference

4 December 2017

volume

332

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4 December 2017

issue

5

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4 December 2017

page(s)

1183-1193

1 reference

FTIR difference spectroscopy of bacteriorhodopsin: toward a molecular model

4 December 2017

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7 January 2021

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Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy

7 January 2021

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Electron-crystallographic refinement of the structure of bacteriorhodopsin

7 January 2021

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X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phases

7 January 2021

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Proton transfer pathways in bacteriorhodopsin at 2.3 angstrom resolution

7 January 2021

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Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin-lipid complex

7 January 2021

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Protein, lipid and water organization in bacteriorhodopsin crystals: a molecular view of the purple membrane at 1.9 A resolution

7 January 2021

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Structure of bacteriorhodopsin at 1.55 A resolution

7 January 2021

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pKa calculations suggest storage of an excess proton in a hydrogen-bonded water network in bacteriorhodopsin

7 January 2021

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Structural changes during the formation of early intermediates in the bacteriorhodopsin photocycle

7 January 2021

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Structural changes in bacteriorhodopsin during ion transport at 2 angstrom resolution

7 January 2021

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High-resolution X-ray structure of an early intermediate in the bacteriorhodopsin photocycle

7 January 2021

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Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin

7 January 2021

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Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin

7 January 2021

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Molecular mechanism of vectorial proton translocation by bacteriorhodopsin

7 January 2021

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Structure of an early intermediate in the M-state phase of the bacteriorhodopsin photocycle

7 January 2021

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Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate

7 January 2021

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Crystallographic structure of the K intermediate of bacteriorhodopsin: conservation of free energy after photoisomerization of the retinal

7 January 2021

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Crystallographic structure of the retinal and the protein after deprotonation of the Schiff base: the switch in the bacteriorhodopsin photocycle

7 January 2021

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Mechanism of Proton Transport in Bacteriorhodopsin from Crystallographic Structures of the K, L, M1, M2, and M2′ Intermediates of the Photocycle

7 January 2021

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7 January 2021

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Connectivity of the retinal Schiff base to Asp85 and Asp96 during the bacteriorhodopsin photocycle: the local-access model

7 January 2021

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Multiple-site titration curves of proteins: an analysis of exact and approximate methods for their calculation

7 January 2021

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pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model

7 January 2021

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A Novel View of pH Titration in Biomolecules†

7 January 2021

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Electrostatic calculations of the pKa values of ionizable groups in bacteriorhodopsin

7 January 2021

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THEMATICS: a simple computational predictor of enzyme function from structure

7 January 2021

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Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network

7 January 2021

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Environmental effects on the protonation states of active site residues in bacteriorhodopsin

7 January 2021

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Estimated acid dissociation constants of the Schiff base, Asp-85, and Arg-82 during the bacteriorhodopsin photocycle

7 January 2021

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The two pKa's of aspartate-85 and control of thermal isomerization and proton release in the arginine-82 to lysine mutant of bacteriorhodopsin.

7 January 2021

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Titration of aspartate-85 in bacteriorhodopsin: what it says about chromophore isomerization and proton release

7 January 2021

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Protonation reactions and their coupling in bacteriorhodopsin

7 January 2021

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Azide reduces the hydrophobic barrier of the bacteriorhodopsin proton channel

7 January 2021

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Subsecond proton-hole propagation in bacteriorhodopsin

7 January 2021

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Structural characterization of the L-to-M transition of the bacteriorhodopsin photocycle

7 January 2021

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Two progressive substrates of the M-intermediate can be identified in glucose-embedded, wild-type bacteriorhodopsin

7 January 2021

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A three-dimensional difference map of the N intermediate in the bacteriorhodopsin photocycle: part of the F helix tilts in the M to N transition

7 January 2021

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Existence of a proton transfer chain in bacteriorhodopsin: participation of Glu-194 in the release of protons to the extracellular surface

7 January 2021

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The proton release group of bacteriorhodopsin controls the rate of the final step of its photocycle at low pH.

7 January 2021

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Bacteriorhodopsin can function without a covalent linkage between retinal and protein.

7 January 2021

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A covalent link between the chromophore and the protein backbone of bacteriorhodopsin is not required for forming a photochemically active pigment analogous to the wild type

7 January 2021

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Proton transfer from Asp-96 to the bacteriorhodopsin Schiff base is caused by a decrease of the pKa of Asp-96 which follows a protein backbone conformational change

7 January 2021

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7 January 2021

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Protonation states and pH titration in the photocycle of photoactive yellow protein

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

7 January 2021

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Interaction of proton and chloride transfer pathways in recombinant bacteriorhodopsin with chloride transport activity: implications for the chloride translocation mechanism

7 January 2021

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7 January 2021

Identifiers

1 reference

4 December 2017

1 reference