(Q44673438)

5 December 2017

title

The impact of genomics on the study of natural variation in Arabidopsis (English)

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5 December 2017

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Justin O Borevitz

1

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author name string

Magnus Nordborg

series ordinal

2

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5 December 2017

language of work or name

English

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publication date

1 June 2003

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5 December 2017

number of pages

8

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inferred from page(s)

published in

Plant Physiology

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5 December 2017

volume

132

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5 December 2017

issue

2

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5 December 2017

page(s)

718-725

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A relationship between cancer of stomach and the ABO blood groups

5 December 2017

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27 August 2018

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27 August 2018

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27 August 2018

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Hd3a, a rice ortholog of the Arabidopsis FT gene, promotes transition to flowering downstream of Hd1 under short-day conditions.

27 August 2018

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Testing models of selection and demography in Drosophila simulans

27 August 2018

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Signature of balancing selection in Arabidopsis

27 August 2018

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27 August 2018

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27 August 2018

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27 August 2018

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Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana

27 August 2018

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27 August 2018

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27 August 2018

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Arabidopsis, the Rosetta stone of flowering time?

27 August 2018

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Dissecting the architecture of a quantitative trait locus in yeast

27 August 2018

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Quantitative trait loci controlling light and hormone response in two accessions of Arabidopsis thaliana

27 August 2018

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Genomic control, a new approach to genetic-based association studies

27 August 2018

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Fine-scale mapping of disease loci via shattered coalescent modeling of genealogies.

27 August 2018

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Positional candidate cloning of a QTL in dairy cattle: identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition

27 August 2018

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Mapping and analysis of quantitative trait loci in experimental populations

27 August 2018

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Linkage disequilibrium: what history has to tell us.

27 August 2018

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Molecular population genetics

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

The extent of linkage disequilibrium in Arabidopsis thaliana

27 August 2018

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The Arabidopsis epithiospecifier protein promotes the hydrolysis of glucosinolates to nitriles and influences Trichoplusia ni herbivory

27 August 2018

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A physical amplified fragment-length polymorphism map of Arabidopsis.

27 August 2018

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Natural variation in light sensitivity of Arabidopsis

27 August 2018

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A QTL for flowering time in Arabidopsis reveals a novel allele of CRY2.

27 August 2018

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Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21.

27 August 2018

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A gene controlling variation in Arabidopsis glucosinolate composition is part of the methionine chain elongation pathway

27 August 2018

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Methods to detect selection in populations with applications to the human

27 August 2018

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The genetic architecture of quantitative traits

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Bayesian analysis of haplotypes for linkage disequilibrium mapping

27 August 2018

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High-resolution haplotype structure in the human genome

27 August 2018

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Dwarf8 polymorphisms associate with variation in flowering time

27 August 2018

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Hd6, a rice quantitative trait locus involved in photoperiod sensitivity, encodes the alpha subunit of protein kinase CK2.

27 August 2018

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Significance analysis of microarrays applied to the ionizing radiation response

27 August 2018

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Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate-dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis

27 August 2018

1 reference

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Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Nucleotide sequence variation at two genes of the phenylpropanoid pathway, the FAH1 and F3H genes, in Arabidopsis thaliana

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Genetic isolation by distance in Arabidopsis thaliana: biogeography and postglacial colonization of Europe

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

The Arabidopsis knockout facility at the University of Wisconsin-Madison.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

The coalescent in an exponentially growing metapopulation and its application to Arabidopsis thaliana

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Determination of single-nucleotide polymorphisms by real-time pyrophosphate DNA sequencing

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

When did the human population size start increasing?

27 August 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

fw2.2: a quantitative trait locus key to the evolution of tomato fruit size

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Bayesian fine-scale mapping of disease loci, by hidden Markov models.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Association mapping in structured populations

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

A recombination hotspot delimits a wild-species quantitative trait locus for tomato sugar content to 484 bp within an invertase gene.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Naturally occurring variation in Arabidopsis: an underexploited resource for plant genetics

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Genome-wide mapping with biallelic markers in Arabidopsis thaliana

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Assessment of linkage disequilibrium by the decay of haplotype sharing, with application to fine-scale genetic mapping

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

DNA variation in the wild plant Arabidopsis thaliana revealed by amplified fragment length polymorphism analysis

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

High-resolution mapping of quantitative trait loci for sternopleural bristle number in Drosophila melanogaster

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

AFLP analysis of genetic diversity within and between Arabidopsis thaliana ecotypes.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

FLOWERING LOCUS C encodes a novel MADS domain protein that acts as a repressor of flowering

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

The FLF MADS box gene: a repressor of flowering in Arabidopsis regulated by vernalization and methylation

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Direct allelic variation scanning of the yeast genome.

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Two sites in the Delta gene region contribute to naturally occurring variation in bristle number in Drosophila melanogaster

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Analysis of natural allelic variation at flowering time loci in the Landsberg erecta and Cape Verde Islands ecotypes of Arabidopsis thaliana

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

The evolution of apical dominance in maize

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Genetic dissection of complex traits

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Evidence for positive selection in the superoxide dismutase (Sod) region of Drosophila melanogaster

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Naturally occurring variation in bristle number and DNA polymorphisms at the scabrous locus of Drosophila melanogaster

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Haplotypic divergence coupled with lack of diversity at the Arabidopsis thaliana alcohol dehydrogenase locus: roles for both balancing and directional selection?

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

AFLP: a new technique for DNA fingerprinting

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Restriction fragment length polymorphism linkage map for Arabidopsis thaliana

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

Linkage disequilibrium mapping in isolated founder populations: diastrophic dysplasia in Finland

27 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=523862

QTL analysis of flowering time in Arabidopsis thaliana

27 August 2018

1 reference

12 December 2020

A deletion in the PHYD gene of the Arabidopsis Wassilewskija ecotype defines a role for phytochrome D in red/far-red light sensing

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12 December 2020

Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population

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12 December 2020

Allelic discrimination using fluorogenic probes and the 5' nuclease assay

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12 December 2020

Automated genotyping using the DNA MassArray technology

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12 December 2020

Identifiers

DOI

10.1104/PP.103.023549

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5 December 2017

0 references

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