(Q44925148)

7 December 2017

title

Detecting site-specific biochemical constraints through substitution mapping (English)

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7 December 2017

1

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7 December 2017

publication date

12 August 2008

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Journal of Molecular Evolution

7 December 2017

published in

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7 December 2017

volume

67

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7 December 2017

issue

3

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7 December 2017

page(s)

257-265

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Rate4Site: an algorithmic tool for the identification of functional regions in proteins by surface mapping of evolutionary determinants within their homologues

7 December 2017

cites work

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00239-008-9139-8

Bio++: a set of C++ libraries for sequence analysis, phylogenetics, molecular evolution and population genetics

21 January 2018

1 reference

12 December 2020

A new method of inference of ancestral nucleotide and amino acid sequences

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12 December 2020

Detecting Site-Specific Physicochemical Selective Pressures: Applications to the Class I HLA of the Human Major Histocompatibility Complex and the SRK of the Plant Sporophytic Self-Incompatibility System

1 reference

12 December 2020

Mapping mutations on phylogenies

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12 December 2020

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

1 reference

12 December 2020

Structure of yeast triosephosphate isomerase at 1.9-A resolution

1 reference

12 December 2020

ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information

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12 December 2020

AAindex: amino acid index database

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12 December 2020

Assessing the impact of secondary structure and solvent accessibility on protein evolution.

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12 December 2020

TreeSAAP: Selection on Amino Acid Properties using phylogenetic trees

1 reference

12 December 2020

Mutation matrices and physical-chemical properties: correlations and implications

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12 December 2020

An evolutionary trace method defines binding surfaces common to protein families

1 reference

12 December 2020

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

12 December 2020

Identification of physicochemical selective pressure on protein encoding nucleotide sequences

1 reference

12 December 2020

Site-Specific Evolutionary Rate Inference: Taking Phylogenetic Uncertainty into Account

1 reference

12 December 2020

Raster3D: photorealistic molecular graphics

1 reference

12 December 2020

Different versions of the Dayhoff rate matrix

1 reference

12 December 2020

Detecting groups of coevolving positions in a molecule: a clustering approach

1 reference

12 December 2020

Comparison of site-specific rate-inference methods for protein sequences: empirical Bayesian methods are superior

1 reference

12 December 2020

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

1 reference

12 December 2020

A model-based approach for detecting coevolving positions in a molecule.

1 reference

12 December 2020

Evolutionary trees from DNA sequences: A maximum likelihood approach

1 reference

12 December 2020

What amino acid properties affect protein evolution?

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12 December 2020

Amino acid difference formula to help explain protein evolution

1 reference

12 December 2020

10.1007/S00239-008-9139-8

Identifiers

DOI

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7 December 2017

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