(Q45013568)

English

Quantitative analysis of the mitochondrial and plastid proteomes of the moss Physcomitrella patens reveals protein macrocompartmentation and microcompartmentation

scientific article published on 10 February 2014

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scholarly article

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Europe PubMed Central

PubMed publication ID

8 December 2017

Quantitative analysis of the mitochondrial and plastid proteomes of the moss Physcomitrella patens reveals protein macrocompartmentation and microcompartmentation (English)

1 reference

Europe PubMed Central

PubMed publication ID

8 December 2017

Physcomitrella patens

object named as

Physcomitrella patens

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based on heuristic

inferred from title

12

object named as

Ralf Reski

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Europe PubMed Central

PubMed publication ID

8 December 2017

author name string

Stefanie J Mueller

1

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8 December 2017

Daniel Lang

2

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8 December 2017

Sebastian N W Hoernstein

3

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8 December 2017

Erika G E Lang

4

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8 December 2017

Christian Schuessele

5

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8 December 2017

Anton Schmidt

6

1 reference

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PubMed publication ID

8 December 2017

Melanie Fluck

7

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8 December 2017

Desirée Leisibach

8

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Europe PubMed Central

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8 December 2017

Christina Niegl

9

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8 December 2017

Andreas D Zimmer

10

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8 December 2017

Andreas Schlosser

11

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8 December 2017

language of work or name

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publication date

10 February 2014

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8 December 2017

Plant Physiology

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8 December 2017

164

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PubMed publication ID

8 December 2017

4

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Europe PubMed Central

PubMed publication ID

8 December 2017

2081-2095

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Europe PubMed Central

PubMed publication ID

8 December 2017

Induction of budding on chloronemata and caulonemata of the moss, Physcomitrella patens, using isopentenyladenine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Green targeting predictor and ambiguous targeting predictor 2: the pitfalls of plant protein targeting prediction and of transient protein expression in heterologous systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Transorganellar complementation redefines the biochemical continuity of endoplasmic reticulum and chloroplasts

1 reference

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29 September 2018

The effect of organelle discovery upon sub-cellular protein localisation.

1 reference

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29 September 2018

Acquisition, conservation, and loss of dual-targeted proteins in land plants.

1 reference

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29 September 2018

Construction of plastid reference proteomes for maize and Arabidopsis and evaluation of their orthologous relationships; the concept of orthoproteomics

1 reference

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29 September 2018

SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis

1 reference

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29 September 2018

Chloroplast biogenesis is regulated by direct action of the ubiquitin-proteasome system.

1 reference

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29 September 2018

Widespread impact of horizontal gene transfer on plant colonization of land

1 reference

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29 September 2018

The biosynthetic capacities of the plastids and integration between cytoplasmic and chloroplast processes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Mitochondrial import efficiency of ATFS-1 regulates mitochondrial UPR activation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Protein-induced modulation of chloroplast membrane morphology

1 reference

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29 September 2018

Quantitative analysis of organelle distribution and dynamics in Physcomitrella patens protonemal cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

The relevance of compartmentation for cysteine synthesis in phototrophic organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

The cytonuclear dimension of allopolyploid evolution: an example from cotton using rubisco

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Segregation of molecules at cell division reveals native protein localization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Unique components of the plant mitochondrial protein import apparatus

1 reference

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29 September 2018

Pulsing of membrane potential in individual mitochondria: a stress-induced mechanism to regulate respiratory bioenergetics in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Plastid stromules are induced by stress treatments acting through abscisic acid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Fumarase: a paradigm of dual targeting and dual localized functions

1 reference

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29 September 2018

Plastid proteomics in higher plants: current state and future goals.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Proteome analysis of chloroplasts from the moss Physcomitrella patens (Hedw.) B.S.G.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Plastid stromule branching coincides with contiguous endoplasmic reticulum dynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser

1 reference

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29 September 2018

Mosaic origin of the mitochondrial proteome

1 reference

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29 September 2018

Simultaneous isolation of pure and intact chloroplasts and mitochondria from moss as the basis for sub-cellular proteomics

1 reference

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29 September 2018

Evolutionary crossroads in developmental biology: Physcomitrella patens

1 reference

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29 September 2018

The plant PRAT proteins - preprotein and amino acid transport in mitochondria and chloroplasts.

1 reference

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29 September 2018

Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity

1 reference

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29 September 2018

Dual targeting of mitochondrial proteins: mechanism, regulation and function

1 reference

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29 September 2018

Comparison of the chloroplast peroxidase system in the chlorophyte Chlamydomonas reinhardtii, the bryophyte Physcomitrella patens, the lycophyte Selaginella moellendorffii and the seed plant Arabidopsis thaliana

1 reference

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29 September 2018

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

1 reference

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29 September 2018

Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3982764

29 September 2018

Evolutionary origins of metabolic compartmentalization in eukaryotes.

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29 September 2018

PLAZA: a comparative genomics resource to study gene and genome evolution in plants

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29 September 2018

The Pfam protein families database

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29 September 2018

Evolutionary genomics of LysM genes in land plants

1 reference

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29 September 2018

An ER-mitochondria tethering complex revealed by a synthetic biology screen

1 reference

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29 September 2018

What can mitochondrial heterogeneity tell us about mitochondrial dynamics and autophagy?

1 reference

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29 September 2018

A proteomic survey of Chlamydomonas reinhardtii mitochondria sheds new light on the metabolic plasticity of the organelle and on the nature of the alpha-proteobacterial mitochondrial ancestor

1 reference

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29 September 2018

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

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29 September 2018

Experimental analysis of the rice mitochondrial proteome, its biogenesis, and heterogeneity

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29 September 2018

Exploring plant biodiversity: the Physcomitrella genome and beyond.

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29 September 2018

Mobilization of rubisco and stroma-localized fluorescent proteins of chloroplasts to the vacuole by an ATG gene-dependent autophagic process.

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A mitochondrial protein compendium elucidates complex I disease biology

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29 September 2018

Reconstructing evolution: gene transfer from plastids to the nucleus

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29 September 2018

Sorting signals, N-terminal modifications and abundance of the chloroplast proteome

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29 September 2018

Slow molecular evolution in 18S rDNA, rbcL and nad5 genes of mosses compared with higher plants

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29 September 2018

Dynamic morphology of plastids and stromules in angiosperm plants

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29 September 2018

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

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29 September 2018

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29 September 2018

An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens

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29 September 2018

A mitochondrial protein homologous to the mammalian peripheral-type benzodiazepine receptor is essential for stress adaptation in plants

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29 September 2018

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29 September 2018

Characterization of the preprotein and amino acid transporter gene family in Arabidopsis

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29 September 2018

SUBA: the Arabidopsis Subcellular Database.

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29 September 2018

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29 September 2018

The function of peroxiredoxins in plant organelle redox metabolism.

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29 September 2018

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29 September 2018

The moss Physcomitrella patens.

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29 September 2018

Use of Physcomitrella patens actin 5' regions for high transgene expression: importance of 5' introns

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29 September 2018

Representation and high-quality annotation of the Physcomitrella patens transcriptome demonstrates a high proportion of proteins involved in metabolism in mosses

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29 September 2018

Molecular tools to study Physcomitrella patens

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29 September 2018

Catalysis, subcellular localization, expression and evolution of the targeting peptides degrading protease, AtPreP2.

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29 September 2018

ProtTest: selection of best-fit models of protein evolution

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29 September 2018

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29 September 2018

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29 September 2018

Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins

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29 September 2018

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29 September 2018

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29 September 2018

Analysis of the Arabidopsis mitochondrial proteome

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29 September 2018

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29 September 2018

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29 September 2018

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29 September 2018

Localization of organelle proteins by isotope tagging (LOPIT)

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis

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https://pubmed.ncbi.nlm.nih.gov/24515833

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of genuine residents of plant endomembrane organelles using isotope tagging and multivariate statistics

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Formate dehydrogenase in Arabidopsis thaliana: characterization and possible targeting to the chloroplast

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Prx Q protein of Arabidopsis thaliana is a member of the luminal chloroplast proteome

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stromules: recent insights into a long neglected feature of plastid morphology and function

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Active protein transport through plastid tubules: velocity quantified by fluorescence correlation spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/24515833

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.114.235754

1 reference

Europe PubMed Central

PubMed publication ID

8 December 2017

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 December 2017

ResearchGate publication ID

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