(Q45141874)

English

PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings

scientific article published on 2 April 2013

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scholarly article

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Europe PubMed Central

PubMed publication ID

10 December 2017

PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings (English)

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PubMed publication ID

10 December 2017

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10 December 2017

author name string

Xuncheng Liu

1

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10 December 2017

Chia-Yang Chen

2

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10 December 2017

Ko-Ching Wang

3

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10 December 2017

Ming Luo

4

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10 December 2017

Ready Tai

5

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10 December 2017

Lianyu Yuan

6

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10 December 2017

Minglei Zhao

7

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10 December 2017

Songguang Yang

8

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10 December 2017

Gang Tian

9

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10 December 2017

Yuhai Cui

10

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10 December 2017

Hsu-Liang Hsieh

11

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10 December 2017

publication date

2 April 2013

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10 December 2017

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10 December 2017

25

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4

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10 December 2017

1258-1273

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Europe PubMed Central

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10 December 2017

copyright license

Creative Commons Attribution 4.0 International

20 January 2021

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April 2022 Public Data File from Crossref

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HISTONE DEACETYLASE19 interacts with HSL1 and participates in the repression of seed maturation genes in Arabidopsis seedlings

1 reference

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Histone deacetylase HDA6 is functionally associated with AS1 in repression of KNOX genes in arabidopsis.

1 reference

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Phytochrome-imposed oscillations in PIF3 protein abundance regulate hypocotyl growth under diurnal light/dark conditions in Arabidopsis

1 reference

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Subcellular localization of class II HDAs in Arabidopsis thaliana: nucleocytoplasmic shuttling of HDA15 is driven by light

1 reference

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Functional profiling identifies genes involved in organ-specific branches of the PIF3 regulatory network in Arabidopsis

1 reference

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DELLAs regulate chlorophyll and carotenoid biosynthesis to prevent photooxidative damage during seedling deetiolation in Arabidopsis.

1 reference

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A glutathione S-transferase regulated by light and hormones participates in the modulation of Arabidopsis seedling development

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Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors.

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Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis.

1 reference

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EIN3/EIL1 cooperate with PIF1 to prevent photo-oxidation and to promote greening of Arabidopsis seedlings

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Definition of early transcriptional circuitry involved in light-induced reversal of PIF-imposed repression of photomorphogenesis in young Arabidopsis seedlings.

1 reference

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Arabidopsis homolog of the yeast TREX-2 mRNA export complex: components and anchoring nucleoporin

1 reference

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Phytochrome B and histone deacetylase 6 control light-induced chromatin compaction in Arabidopsis thaliana

1 reference

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Histone acetyltransferase GCN5 interferes with the miRNA pathway in Arabidopsis

1 reference

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29 September 2018

PIF3 is a repressor of chloroplast development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663266

29 September 2018

Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors

1 reference

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29 September 2018

Regulated proteolysis in light-related signaling pathways

1 reference

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betaC1, the pathogenicity factor of TYLCCNV, interacts with AS1 to alter leaf development and suppress selective jasmonic acid responses

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Arabidopsis WRKY38 and WRKY62 transcription factors interact with histone deacetylase 19 in basal defense

1 reference

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Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

1 reference

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29 September 2018

Histone modifications and expression of light-regulated genes in Arabidopsis are cooperatively influenced by changing light conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663266

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HDA6 is required for jasmonate response, senescence and flowering in Arabidopsis

1 reference

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The basic helix-loop-helix transcription factor PIF5 acts on ethylene biosynthesis and phytochrome signaling by distinct mechanisms

1 reference

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The complex language of chromatin regulation during transcription

1 reference

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Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development.

1 reference

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29 September 2018

PIF3 regulates anthocyanin biosynthesis in an HY5-dependent manner with both factors directly binding anthocyanin biosynthetic gene promoters in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663266

29 September 2018

Light-regulated transcriptional networks in higher plants

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Tetrapyrrole biosynthesis in higher plants

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Photoactivated phytochrome induces rapid PIF3 phosphorylation prior to proteasome-mediated degradation.

1 reference

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PIF1 is regulated by light-mediated degradation through the ubiquitin-26S proteasome pathway to optimize photomorphogenesis of seedlings in Arabidopsis

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Conservation and divergence of light-regulated genome expression patterns during seedling development in rice and Arabidopsis.

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Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses

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Class II histone deacetylases: from sequence to function, regulation, and clinical implication

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Modular cloning in plant cells

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An alternative tandem affinity purification strategy applied to Arabidopsis protein complex isolation

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Arabidopsis HAF2 gene encoding TATA-binding protein (TBP)-associated factor TAF1, is required to integrate light signals to regulate gene expression and growth

1 reference

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1 reference

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1 reference

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Degradation of phytochrome interacting factor 3 in phytochrome-mediated light signaling.

1 reference

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Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis

1 reference

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EVOLUTION OF LIGHT-REGULATED PLANT PROMOTERS.

1 reference

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Functional Characterization of Phytochrome Interacting Factor 3 in Phytochrome-Mediated Light Signal Transduction

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Chromatin-remodeling and memory factors. New regulators of plant development

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Two interacting bZIP proteins are direct targets of COP1-mediated control of light-dependent gene expression in Arabidopsis

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PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis.

1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663266

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1 reference

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1 reference

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HY5 stability and activity in arabidopsis is regulated by phosphorylation in its COP1 binding domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663266

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Light control of plant development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663266

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The Arabidopsis HY5 gene encodes a bZIP protein that regulates stimulus-induced development of root and hypocotyl

1 reference

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Histone deacetylases associated with the mSin3 corepressor mediate mad transcriptional repression

1 reference

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Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis GCN5, HD1, and TAF1/HAF2 interact to regulate histone acetylation required for light-responsive gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Targeted histone acetylation and altered nuclease accessibility over short regions of the pea plastocyanin gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HDA6 directly interacts with DNA methyltransferase MET1 and maintains transposable element silencing in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Profiling histone modification patterns in plants using genomic tiling microarrays

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of root greening by light and auxin/cytokinin signaling in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HISTONE DEACETYLASE6 interacts with FLOWERING LOCUS D and regulates flowering in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A transcriptional repression motif in the MADS factor AGL15 is involved in recruitment of histone deacetylase complex components

1 reference

https://pubmed.ncbi.nlm.nih.gov/23548744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1105/TPC.113.109710

1 reference

Europe PubMed Central

PubMed publication ID

10 December 2017

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

10 December 2017

ResearchGate publication ID

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