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ARAMEMNON, a novel database for Arabidopsis integral membrane proteins
scientific article
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instance of
scholarly article
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
title
ARAMEMNON, a novel database for Arabidopsis integral membrane proteins
(English)
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
main subject
database
0 references
membrane protein
1 reference
based on heuristic
inferred from title
author
Eric van der Graaff
series ordinal
3
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
Wolf-Bernd Frommer
series ordinal
7
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stated in
Q5412157
PubMed ID
12529511
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13 December 2017
Reinhard Kunze
series ordinal
9
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
Ulf-Ingo Flügge
series ordinal
8
object named as
Ulf-Ingo Flügge
1 reference
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Q5412157
PubMed ID
12529511
retrieved
13 December 2017
author name string
Rainer Schwacke
series ordinal
1
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
Anja Schneider
series ordinal
2
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
Karsten Fischer
series ordinal
4
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Q5412157
PubMed ID
12529511
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13 December 2017
Elisabetta Catoni
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5
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Q5412157
PubMed ID
12529511
retrieved
13 December 2017
Marcelo Desimone
series ordinal
6
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Q5412157
PubMed ID
12529511
retrieved
13 December 2017
language of work or name
English
0 references
publication date
1 January 2003
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
published in
Plant Physiology
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Q5412157
PubMed ID
12529511
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13 December 2017
volume
131
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Q5412157
PubMed ID
12529511
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13 December 2017
page(s)
16-26
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Q5412157
PubMed ID
12529511
retrieved
13 December 2017
issue
1
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Q5412157
PubMed ID
12529511
retrieved
13 December 2017
cites work
Analysis of the plastidic phosphate translocator gene family in Arabidopsis and identification of new phosphate translocator-homologous transporters, classified by their putative substrate-binding site
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PubMed Central
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29 September 2018
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29 September 2018
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29 September 2018
Prediction of organellar targeting signals
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Dual targeting to mitochondria and chloroplasts.
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PubMed Central
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29 September 2018
The HMMTOP transmembrane topology prediction server
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29 September 2018
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29 September 2018
Phylogenetic relationships within cation transporter families of Arabidopsis
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29 September 2018
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29 September 2018
Evaluation of methods for the prediction of membrane spanning regions
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29 September 2018
Identification of novel families of membrane proteins from the model plant Arabidopsis thaliana.
1 reference
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PubMed Central
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29 September 2018
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
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PubMed Central
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29 September 2018
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
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29 September 2018
Proportion of membrane proteins in proteomes of 15 single-cell organisms analyzed by the SOSUI prediction system.
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PubMed Central
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29 September 2018
A functional-phylogenetic system for the classification of transport proteins
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PubMed Central
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29 September 2018
ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
A hidden Markov model for predicting transmembrane helices in protein sequences
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Prediction of signal peptides and signal anchors by a hidden Markov model.
1 reference
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PubMed Central
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29 September 2018
Principles governing amino acid composition of integral membrane proteins: application to topology prediction
1 reference
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29 September 2018
SOSUI: classification and secondary structure prediction system for membrane proteins
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
1 reference
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PubMed Central
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29 September 2018
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
retrieved
29 September 2018
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Computational method to predict mitochondrially imported proteins and their targeting sequences
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Sequence Analysis of the Genome of the Unicellular Cyanobacterium Synechocystis sp. Strain PCC6803. II. Sequence Determination of the Entire Genome and Assignment of Potential Protein-coding Regions
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Topology prediction for helical transmembrane proteins at 86% accuracy
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Topology prediction of membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
retrieved
29 September 2018
Effective protein sequence comparison
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
retrieved
29 September 2018
An overview of membrane transport proteins in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Prediction of transmembrane segments in proteins utilising multiple sequence alignments
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
TopPred II: an improved software for membrane protein structure predictions
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
The robustness of two phylogenetic methods: four-taxon simulations reveal a slight superiority of maximum likelihood over neighbor joining
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Analysis of membrane and surface protein sequences with the hydrophobic moment plot
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Improved tools for biological sequence comparison
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
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29 September 2018
A knowledge base for predicting protein localization sites in eukaryotic cells
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=166783
retrieved
29 September 2018
Do more complex organisms have a greater proportion of membrane proteins in their genomes?
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12529511
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Consensus predictions of membrane protein topology
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12529511
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Transmembrane topology prediction methods: a re-assessment and improvement by a consensus method using a dataset of experimentally-characterized transmembrane topologies
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/12529511
retrieved
12 December 2020
based on heuristic
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Identifiers
DOI
10.1104/PP.011577
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
PMCID
166783
0 references
PubMed ID
12529511
1 reference
stated in
Q5412157
PubMed ID
12529511
retrieved
13 December 2017
ResearchGate publication ID
10948430
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