(Q45752983)

15 December 2017

title

Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain (English)

1 reference

15 December 2017

Lichen Zhang

16

0 references

Sheng-Da Zhang

Sheng-Da Zhang

2

0 references

François Alberto

François Alberto

5

0 references

Pascal Arnoux

Pascal Arnoux

3

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David Pignol

David Pignol

25

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Bernard Henrissat

19

Bernard Henrissat

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15 December 2017

11

Monique Sabaty

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15 December 2017

Nicolas Ginet

10

Nicolas Ginet

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15 December 2017

Emmanuel Talla

26

Emmanuel Talla

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15 December 2017

author name string

Boyang Ji

1

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15 December 2017

Zoe Rouy

4

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15 December 2017

Nadège Philippe

6

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15 December 2017

Dorothée Murat

7

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15 December 2017

Wei-Jia Zhang

8

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15 December 2017

Jean-Baptiste Rioux

9

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15 December 2017

Sophie Mangenot

12

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15 December 2017

Nathalie Pradel

13

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15 December 2017

Jiesheng Tian

14

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15 December 2017

Jing Yang

15

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15 December 2017

Wenyan Zhang

17

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15 December 2017

Hongmiao Pan

18

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15 December 2017

Pedro M Coutinho

20

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15 December 2017

Ying Li

21

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15 December 2017

Tian Xiao

22

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15 December 2017

Claudine Médigue

23

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15 December 2017

Valérie Barbe

24

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15 December 2017

Long-Fei Wu

27

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15 December 2017

publication date

10 July 2013

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15 December 2017

Environmental Microbiology

published in

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15 December 2017

volume

16

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15 December 2017

issue

2

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15 December 2017

page(s)

525-544

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15 December 2017

ProtTest: selection of best-fit models of protein evolution

cites work

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Common ancestry of iron oxide- and iron-sulfide-based biomineralization in magnetotactic bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Multiple Rubisco forms in proteobacteria: their functional significance in relation to CO2 acquisition by the CBB cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Magnetosome formation in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Comparative genomic structure of prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Methylation-independent aerotaxis mediated by the Escherichia coli Aer protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Siderophore uptake in bacteria and the battle for iron with the host; a bird's eye view

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Recent structural insights into the expanding world of carbohydrate-active enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

MamK, a bacterial actin, forms dynamic filaments in vivo that are regulated by the acidic proteins MamJ and LimJ

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

New insights on trehalose: a multifunctional molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Comparative analysis of four Campylobacterales

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Magnetotactic bacteria and magnetosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Evolutionary trees from DNA sequences: A maximum likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Oxidation of reduced inorganic sulfur compounds by bacteria: emergence of a common mechanism?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Co-evolution of proteins with their interaction partners

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Automated finishing with autofinish

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Bacterial chemoreceptors: high-performance signaling in networked arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

IslandPath: aiding detection of genomic islands in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Beyond the Calvin cycle: autotrophic carbon fixation in the ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Genomics, genetics, and cell biology of magnetosome formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Comparative analysis of magnetosome gene clusters in magnetotactic bacteria provides further evidence for horizontal gene transfer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Role of porins in iron uptake by Mycobacterium smegmatis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

The pathway tools pathway prediction algorithm

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Compatible solute biosynthesis in cyanobacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Structural biology of bacterial iron uptake

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Circos: an information aesthetic for comparative genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Versatile and open software for comparing large genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

A cultured greigite-producing magnetotactic bacterium in a novel group of sulfate-reducing bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Novel magnetite-producing magnetotactic bacteria belonging to the Gammaproteobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Insight into the evolution of magnetotaxis in Magnetospirillum spp., based on mam gene phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Monophyletic origin of magnetotaxis and the first magnetosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

The periplasmic nitrate reductase nap is required for anaerobic growth and involved in redox control of magnetite biomineralization in Magnetospirillum gryphiswaldense

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Functional analysis of the magnetosome island in Magnetospirillum gryphiswaldense: the mamAB operon is sufficient for magnetite biomineralization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Mutation frequencies and antibiotic resistance

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Complete Genome Sequence of the Facultative Anaerobic Magnetotactic Bacterium Magnetospirillum sp. strain AMB-1

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Comprehensive genetic dissection of the magnetosome gene island reveals the step-wise assembly of a prokaryotic organelle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

jModelTest: phylogenetic model averaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Role of trehalose in heat and desiccation tolerance in the soil bacterium Rhizobium etli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Inorganic nitrogen metabolism in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Comparative genome analysis of four magnetotactic bacteria reveals a complex set of group-specific genes implicated in magnetosome biomineralization and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Ferrous iron transport protein B gene (feoB1) plays an accessory role in magnetosome formation in Magnetospirillum gryphiswaldense strain MSR-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Evolution of the bacterial phosphotransferase system: from carriers and enzymes to group translocators

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

The SoxYZ complex carries sulfur cycle intermediates on a peptide swinging arm

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Database resources of the National Center for Biotechnology Information

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

An acidic protein aligns magnetosomes along a filamentous structure in magnetotactic bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Complete genome sequence of the chemolithoautotrophic marine magnetotactic coccus strain MC-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

ISfinder: the reference centre for bacterial insertion sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Distribution and functions of TonB-dependent transporters in marine bacteria and environments: implications for dissolved organic matter utilization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

A hypervariable 130-kilobase genomic region of Magnetospirillum gryphiswaldense comprises a magnetosome island which undergoes frequent rearrangements during stationary growth

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

MicroScope--an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Making sense of it all: bacterial chemotaxis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Magnetospira thiophila gen. nov., sp. nov., a marine magnetotactic bacterium that represents a novel lineage within the Rhodospirillaceae (Alphaproteobacteria).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

A simple, fast, and accurate method of phylogenomic inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Comparative genomic and protein sequence analyses of a complex system controlling bacterial chemotaxis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

Isolation and characterization of a marine magnetotactic spirillum axenic culture QH-2 from an intertidal zone of the China Sea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

DNA repeats lead to the accelerated loss of gene order in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12180

21 January 2018

Identifiers

DOI

10.1111/1462-2920.12180

1 reference

15 December 2017

1 reference

15 December 2017