(Q45799557)

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Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae).

scientific article published on 20 April 2011

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29 January 2020

Two novel Ty1-copia retrotransposons isolated from coffee trees can effectively reveal evolutionary relationships in the Coffea genus (Rubiaceae) (English)

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29 January 2020

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Rubiaceae

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Paulo Mafra D'Almeida Costa

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29 January 2020

Alexandre de Kochko

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Alexandre de Kochko

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29 January 2020

Valérie Poncet

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Valérie Poncet

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29 January 2020

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Perla Hamon

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29 January 2020

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Pierre-Olivier Duroy

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29 January 2020

Christine Dubreuil-Tranchant

3

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29 January 2020

Caroline Duret

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29 January 2020

Norosoa J Razafinarivo

6

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29 January 2020

Emmanuel Couturon

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29 January 2020

Serge Hamon

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29 January 2020

Romain Guyot

11

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29 January 2020

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20 April 2011

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29 January 2020

Molecular Genetics and Genomics

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29 January 2020

285

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29 January 2020

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29 January 2020

447-460

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29 January 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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Transposable element contributions to plant gene and genome evolution

1 reference

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Molecular characterization of an ethylene receptor gene (CcETR1) in coffee trees, its relationship with fruit development and caffeine content

1 reference

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Phylogenetic analysis of chloroplast DNA variation in Coffea L.

1 reference

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Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes

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21 January 2018

Physical mapping of rDNA and heterochromatin in chromosomes of 16 Coffea species: a revised view of species differentiation.

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The genetic diversity and evolution of field pea (Pisum) studied by high throughput retrotransposon based insertion polymorphism (RBIP) marker analysis

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21 January 2018

Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence.

1 reference

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21 January 2018

Applications of retrotransposons as genetic tools in plant biology

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21 January 2018

Construction and characterization of a Coffea canephora BAC library to study the organization of sucrose biosynthesis genes

1 reference

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1 reference

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Isolation and genetic mapping of a Coffea canephora phenylalanine ammonia-lyase gene (CcPAL1) and its involvement in the accumulation of caffeoyl quinic acids

1 reference

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Towards a Phylogeny for Coffea (Rubiaceae): identifying well-supported lineages based on nuclear and plastid DNA sequences

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21 January 2018

Genetic differentiation of wild and cultivated populations: diversity of Coffea canephora Pierre in Uganda.

1 reference

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21 January 2018

Genome Size Variations in Diploid African Coffea Species

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Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

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LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model

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A unified classification system for eukaryotic transposable elements

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Genetic diversity and phylogenetic relationship as revealed by inter simple sequence repeat (ISSR) polymorphism in the genus Oryza

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21 January 2018

Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum)

1 reference

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The distribution of copia-type retrotransposons and the evolutionary history of tomato and related wild species

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AFLP and SSR polymorphism in a Coffea interspecific backcross progeny [( C. heterocalyx x C. canephora) x C. canephora]

1 reference

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12 December 2020

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Pea Ty1-copia group retrotransposons: transpositional activity and use as markers to study genetic diversity in Pisum

1 reference

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EMBOSS: the European Molecular Biology Open Software Suite

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Molecular markers based on LTR retrotransposons BARE-1 and Jeli uncover different strata of evolutionary relationships in diploid wheats

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Current genetic differentiation of Coffea canephora Pierre ex A. Froehn in the Guineo-Congolian African zone: cumulative impact of ancient climatic changes and recent human activities

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10.1007/S00438-011-0617-0

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21505885%20AND%20SRC:MED&resulttype=core&format=json

29 January 2020

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29 January 2020

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