(Q46101484)

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Molecular organization of 5S rDNAs in Rajidae (Chondrichthyes): Structural features and evolution of piscine 5S rRNA genes and nontranscribed intergenic spacers.

scientific article published on 11 April 2006

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Molecular organization of 5S rDNAs in Rajidae (Chondrichthyes): Structural features and evolution of piscine 5S rRNA genes and nontranscribed intergenic spacers (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

object named as

Rajidae

1 reference

based on heuristic

inferred from title

object named as

Chondrichthyes

1 reference

based on heuristic

inferred from title

3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

4

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

author name string

Paola Pasolini

1

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Domenico Costagliola

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

publication date

11 April 2006

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Journal of Molecular Evolution

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

62

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

5

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

564-574

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16612546%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

https://scigraph.springernature.com/pub.10.1007/s00239-005-0118-z

0 references

Slippage synthesis of simple sequence DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

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Dynamics of 5S rDNA in the tilapia (Oreochromis niloticus) genome: repeat units, inverted sequences, pseudogenes and chromosome loci.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organization of 5S rDNA in species of the fish Leporinus: two different genomic locations are characterized by distinct nontranscribed spacers

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

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Identification of Sole(Solea solea)and Greenland Halibut(Reinhardtius hippoglossoides)by PCR Amplification of the 5S rDNA Gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The length and location of CAG trinucleotide repeats in the androgen receptor N-terminal domain affect transactivation function

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The 5S gene internal control region is composed of three distinct sequence elements, organized as two functional domains with variable spacing

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequences in Xenopus 5S DNA required for transcription termination

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Alternative structures in duplex DNA formed within the trinucleotide repeats of the myotonic dystrophy and fragile X loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The concerted evolution of 5S ribosomal genes linked to the repeat units of other multigene families

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequence of 5S rDNA and localization of the ribosomal RNA genes to metaphase chromosomes of the Tilapiine cichlid fish, Oreochromis niloticus

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extraction of high molecular weight DNA from molluscs

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intraindividual and interspecies variation in the 5S rDNA of coregonid fish

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal location and nucleotide sequences of 5S ribosomal DNA of two cyprinid species (Osteichthyes, Pisces).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Major and 5S ribosomal sequences of the largemouth bass Micropterus salmoides (Perciformes, Centrarchidae) are localized in GC-rich regions of the genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A promoter-associated polymorphic repeat modulates PAX-6 expression in human brain

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The primary structure of oocyte and somatic 5S rRNAs from the loach Misgurnus fossilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimate of human gene number provided by genome-wide analysis using Tetraodon nigroviridis DNA sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular drive: a cohesive mode of species evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Studies on the sites expressing evolutionary changes in the structure of eukaryotic 5S ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trinucleotide repeats are clustered in regulatory genes in Saccharomyces cerevisiae.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A CT repeat in the promoter of the chicken malic enzyme gene is essential for function at an alternative transcription start site

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical research on oogenesis. Oocytes and liver cells of the teleost fish Tinca tinca contain different kinds of 5S RNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide Sequence of 5S Ribosomal RNA from Rainbow Trout (Salmo gairdnerii) Liver1

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Highly differentiated and conserved sex chromosome in fish species (Aulopus japonicus: Teleostei, Aulopidae)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Basic local alignment search tool

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sex chromosome linkage of 5S rDNA in rainbow trout (Oncorhynchus mykiss).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MODELTEST: testing the model of DNA substitution

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal mapping and nucleotide sequence of two tandem repeats of Atlantic salmon 5S rDNA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular organization of 5S rDNA in fishes of the genus Brycon

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zebrafish 5S rRNA genes map to the long arms of chromosome 3.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetically unstable CXG repeats are structurally dynamic and have a high propensity for folding. An NMR and UV spectroscopic study

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic organization and evolution of the 5S ribosomal DNA in the ancient fish sturgeon

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulation of epidermal growth factor receptor gene transcription by a polymorphic dinucleotide repeat in intron 1.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two 5S rDNA arrays in neotropical fish species: is it a general rule for fishes?

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Intragenomic polymorphism of the primary structure of 5S rRNA gene variants of the loach (Misgurnus fossilis L.). Determination of the transcriptional activity]

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid miocene-pliocene dispersal and evolution of Mediterranean rajid fauna as inferred by mitochondrial gene variation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular and chromosomal analysis of ribosomal cistrons in two cartilaginous fish, Taeniura lymma and Raja montagui (Chondrichthyes, Batoidea).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A tetranucleotide polymorphic microsatellite, located in the first intron of the tyrosine hydroxylase gene, acts as a transcription regulatory element in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of repetitive DNA sequences carrying 5S rDNA of the triploid ginbuna (Japanese silver crucian carp, Carassius auratus langsdorfi).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

5S rDNA organization in the fish Synbranchus marmoratus (Synbranchidae, Synbranchiformes).

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A transcriptional repressor obtained by alternative translation of a trinucleotide repeat

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical research on oogenesis. RNA accumulation during oogenesis of the dogfish Scyliorhinus caniculus

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differentiation of oocyte- and somatic-type 5S rRNAs in animals

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cytogenetic studies in Sparus auratus (Pisces, Perciformes): molecular organization of 5S rDNA and chromosomal mapping of 5S and 45S ribosomal genes and of telomeric repeats.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal Mapping and Molecular Characterization of Ribosomal RNA Genes in Lebias fasciata (Teleostei, Cyprinodontidae)

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription of human 5S rRNA genes is influenced by an upstream DNA sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA repeats in the human genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16612546

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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