(Q46294943)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28977721%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

title

Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity (English)

1 reference

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31 March 2020

1 reference

3

1 reference

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31 March 2020

Katherine A Harrisson

1

1 reference

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31 March 2020

Marina Telonis-Scott

5

1 reference

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31 March 2020

Jarod Lyon

7

1 reference

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31 March 2020

Brett A Ingram

10

1 reference

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31 March 2020

Han Ming Gan

12

1 reference

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31 March 2020

Christopher M. Austin

13

1 reference

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31 March 2020

Paul Sunnucks

15

1 reference

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31 March 2020

14

Gordon Luikart

1 reference

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31 March 2020

author name string

Stephen J Amish

2

1 reference

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31 March 2020

Shawn R Narum

4

1 reference

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31 March 2020

Meaghan L Rourke

6

1 reference

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31 March 2020

Zeb Tonkin

8

1 reference

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31 March 2020

Mark Lintermans

11

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31 March 2020

Dean M Gilligan

9

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31 March 2020

publication date

8 November 2017

1 reference

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31 March 2020

1 reference

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31 March 2020

volume

26

1 reference

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31 March 2020

issue

22

1 reference

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31 March 2020

page(s)

6253-6269

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Genomics and the future of conservation genetics

31 March 2020

cites work

1 reference

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Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus).

21 January 2018

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21 January 2018

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Trimmomatic: a flexible trimmer for Illumina sequence data

21 January 2018

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Detecting genotypic changes associated with selective mortality at sea in Atlantic salmon: polygenic multilocus analysis surpasses genome scan

21 January 2018

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Transatlantic secondary contact in Atlantic Salmon, comparing microsatellites, a single nucleotide polymorphism array and restriction-site associated DNA sequencing for the resolution of complex spatial structure

21 January 2018

1 reference

TASSEL: software for association mapping of complex traits in diverse samples

21 January 2018

1 reference

Riverscape genomics of a threatened fish across a hydroclimatically heterogeneous river basin

21 January 2018

1 reference

Integration of Random Forest with population-based outlier analyses provides insight on the genomic basis and evolution of run timing in Chinook salmon (Oncorhynchus tshawytscha).

21 January 2018

1 reference

Genetic diversity, linkage disequilibrium, population structure and construction of a core collection of Prunus avium L. landraces and bred cultivars.

21 January 2018

1 reference

Impacts of population structure and analytical models in genome-wide association studies of complex traits in forest trees: a case study in Eucalyptus globulus

21 January 2018

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Stacks: building and genotyping Loci de novo from short-read sequences

21 January 2018

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Stacks: an analysis tool set for population genomics

21 January 2018

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Genome-wide data reveal cryptic diversity and genetic introgression in an Oriental cynopterine fruit bat radiation

21 January 2018

1 reference

Finding needles in a genomic haystack: targeted capture identifies clear signatures of selection in a nonmodel plant species

21 January 2018

1 reference

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

21 January 2018

1 reference

Using environmental correlations to identify loci underlying local adaptation

21 January 2018

1 reference

genhet: an easy-to-use R function to estimate individual heterozygosity

21 January 2018

1 reference

Plastic and evolutionary responses to climate change in fish

21 January 2018

1 reference

The variant call format and VCFtools

21 January 2018

1 reference

When trends intersect: The challenge of protecting freshwater ecosystems under multiple land use and hydrological intensification scenarios

21 January 2018

1 reference

High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L

21 January 2018

1 reference

A framework for variation discovery and genotyping using next-generation DNA sequencing data

21 January 2018

1 reference

Genomic control for association studies

21 January 2018

1 reference

Differences in thermal tolerance among sockeye salmon populations

21 January 2018

1 reference

Shrinkage estimation of the realized relationship matrix

21 January 2018

1 reference

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

21 January 2018

1 reference

Detection and mapping of QTL for temperature tolerance and body size in Chinook salmon (Oncorhynchus tshawytscha) using genotyping by sequencing

21 January 2018

1 reference

Detecting loci under selection in a hierarchically structured population

21 January 2018

1 reference

Estimating genomic diversity and population differentiation - an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri

21 January 2018

1 reference

Genetic rescue of small inbred populations: meta-analysis reveals large and consistent benefits of gene flow

21 January 2018

1 reference

Predicting the probability of outbreeding depression.

21 January 2018

1 reference

Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

21 January 2018

1 reference

Testing for associations between loci and environmental gradients using latent factor mixed models.

21 January 2018

1 reference

Harnessing genomics for delineating conservation units.

21 January 2018

1 reference

Colloquium paper: human adaptations to diet, subsistence, and ecoregion are due to subtle shifts in allele frequency

21 January 2018

1 reference

Using genomics to characterize evolutionary potential for conservation of wild populations

21 January 2018

1 reference

Environmental adaptation in Chinook salmon (Oncorhynchus tshawytscha) throughout their North American range.

21 January 2018

1 reference

Genetic basis of adult migration timing in anadromous steelhead discovered through multivariate association testing.

21 January 2018

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Detecting genetic responses to environmental change

21 January 2018

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Genomic patterns of introgression in rainbow and westslope cutthroat trout illuminated by overlapping paired-end RAD sequencing

21 January 2018

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21 January 2018

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Comparing RADseq and microsatellites to infer complex phylogeographic patterns, an empirical perspective in the Crucian carp, Carassius carassius, L.

21 January 2018

1 reference

A spatial analysis method (SAM) to detect candidate loci for selection: towards a landscape genomics approach to adaptation.

21 January 2018

1 reference

Clumpak: a program for identifying clustering modes and packaging population structure inferences across K.

21 January 2018

1 reference

RAD sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels

21 January 2018

1 reference

A meta-analysis of local adaptation in plants

21 January 2018

1 reference

Development of an alfalfa SNP array and its use to evaluate patterns of population structure and linkage disequilibrium

21 January 2018

1 reference

Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus).

21 January 2018

1 reference

Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes

21 January 2018

1 reference

A high-resolution map of human evolutionary constraint using 29 mammals

21 January 2018

1 reference

RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish

21 January 2018

1 reference

The relative power of genome scans to detect local adaptation depends on sampling design and statistical method

21 January 2018

1 reference

Breaking RAD: an evaluation of the utility of restriction site-associated DNA sequencing for genome scans of adaptation

21 January 2018

1 reference

Revisiting comparisons of genetic diversity in stable and declining species: assessing genome-wide polymorphism in North American bumble bees using RAD sequencing

21 January 2018

1 reference

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field

21 January 2018

1 reference

Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes

21 January 2018

1 reference

The adaptive potential of subtropical rainbowfish in the face of climate change: heritability and heritable plasticity for the expression of candidate genes

21 January 2018

1 reference

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

21 January 2018

1 reference

Seven common mistakes in population genetics and how to avoid them.

21 January 2018

1 reference

A conserved haplotype controls parallel adaptation in geographically distant salmonid populations

21 January 2018

1 reference

Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers

21 January 2018

1 reference

LinkImpute: Fast and Accurate Genotype Imputation for Nonmodel Organisms

21 January 2018

1 reference

Climate change and its implications for Australia's freshwater fish

21 January 2018

1 reference

Thermal adaptation and acclimation of ectotherms from differing aquatic climates

21 January 2018

1 reference

Testing for local adaptation and evolutionary potential along altitudinal gradients in rainforest Drosophila: beyond laboratory estimates.

21 January 2018

1 reference

RAD sequencing highlights polygenic discrimination of habitat ecotypes in the panmictic American eel.

21 January 2018

1 reference

Severe consequences of habitat fragmentation on genetic diversity of an endangered Australian freshwater fish: A call for assisted gene flow

21 January 2018

1 reference

Parallel and nonparallel genome-wide divergence among replicate population pairs of freshwater and anadromous Atlantic salmon

21 January 2018

1 reference

A practical guide to environmental association analysis in landscape genomics.

21 January 2018

1 reference

Association of genetic and phenotypic variability with geography and climate in three southern California oaks

21 January 2018

1 reference

The QTN program and the alleles that matter for evolution: all that's gold does not glitter

21 January 2018

1 reference

Variable stocking effect and endemic population genetic structure in Murray cod Maccullochella peelii

21 January 2018

1 reference

Building evolutionary resilience for conserving biodiversity under climate change

21 January 2018

1 reference

Landscape genomic analysis of candidate genes for climate adaptation in a California endemic oak, Quercus lobata

21 January 2018

1 reference

Genome-wide patterns of differentiation and spatially varying selection between postglacial recolonization lineages of Populus alba (Salicaceae), a widespread forest tree.

21 January 2018

1 reference

21 January 2018

1 reference

Genome scan methods against more complex models: when and how much should we trust them?

21 January 2018

1 reference

Global water resources: vulnerability from climate change and population growth

21 January 2018

1 reference

Accounting for adaptive capacity and uncertainty in assessments of species' climate-change vulnerability

21 January 2018

1 reference

Assessing the benefits and risks of translocations in changing environments: a genetic perspective

21 January 2018

1 reference

Detecting Polygenic Evolution: Problems, Pitfalls, and Promises

21 January 2018

1 reference

Genetic rescue to the rescue

21 January 2018

1 reference

Haplotyping RAD loci: an efficient method to filter paralogs and account for physical linkage

21 January 2018

1 reference

Convergent local adaptation to climate in distantly related conifers

21 January 2018

1 reference

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

21 January 2018

1 reference

Mixed linear model approach adapted for genome-wide association studies

21 January 2018

1 reference

Characterizing genomic variation ofArabidopsis thaliana: the roles of geography and climate

21 January 2018

1 reference

Assisted Gene Flow to Facilitate Local Adaptation to Climate Change

21 January 2018

1 reference

All-scale spatial analysis of ecological data by means of principal coordinates of neighbour matrices

21 January 2018

1 reference

Putting the landscape into the genomics of trees: approaches for understanding local adaptation and population responses to changing climate

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1111/MEC.14368

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28977721%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

1 reference