(Q46846282)

8 January 2018

title

Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation (English)

1 reference

8 January 2018

0 references

4

1 reference

25 December 2017

Jose M Gonzalez

15

1 reference

25 December 2017

Toby Hunt

16

1 reference

25 December 2017

Elspeth A Bruford

33

1 reference

25 December 2017

Carlos García Girón

Carlos G Girón

7

0 references

Michael Murphy

Michael Murphy

24

0 references

Claire Davidson

Claire Davidson

13

0 references

Eric Cox

Eric Cox

12

0 references

Vamsi K Kodali

Vamsi K Kodali

20

0 references

Vinita S Joardar

Vinita Joardar

18

0 references

Jonathan M Mudge

Jonathan M Mudge

5

0 references

Mark Diekhans

8

Mark Diekhans

1 reference

8 January 2018

35

Adam Frankish

1 reference

8 January 2018

29

Marie-Marthe Suner

1 reference

8 January 2018

Andrew E Berry

11

0 references

Fergal J Martin

Fergal J Martin

21

0 references

Mike Kay

Mike P Kay

19

0 references

Carol J Bult

34

Carol J Bult

1 reference

8 January 2018

Kim D. Pruitt

37

Kim D Pruitt

1 reference

8 January 2018

Bronwen Aken

32

Bronwen L Aken

1 reference

8 January 2018

Nuala A O'Leary

2

Nuala A O'Leary

1 reference

8 January 2018

Craig Wallin

6

Craig Wallin

1 reference

8 January 2018

Bhanu Rajput

25

Bhanu Rajput

1 reference

8 January 2018

Lillian D Riddick

27

Lillian D Riddick

1 reference

8 January 2018

Sanjida H Rangwala

26

Sanjida H Rangwala

1 reference

8 January 2018

Kelly M McGarvey

23

Kelly M McGarvey

1 reference

8 January 2018

Shashikant Pujar

1

Shashikant Pujar

1 reference

8 January 2018

author name string

Catherine M Farrell

3

1 reference

8 January 2018

If Barnes

9

1 reference

8 January 2018

Ruth Bennett

10

1 reference

8 January 2018

Tamara Goldfarb

14

1 reference

8 January 2018

John Jackson

17

1 reference

8 January 2018

Monica McAndrews

22

1 reference

8 January 2018

Ruth L Seal

28

1 reference

8 January 2018

David Webb

30

1 reference

8 January 2018

Sophia Zhu

31

1 reference

8 January 2018

Terence Murphy

36

1 reference

8 January 2018

language of work or name

English

0 references

publication date

6 November 2017

1 reference

8 January 2018

published in

Nucleic Acids Research

1 reference

8 January 2018

cites work

Mining for Micropeptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

UniProt Protein Knowledgebase

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Mouse Genome Informatics (MGI): Resources for Mining Mouse Genetic, Genomic, and Biological Data in Support of Primary and Translational Research.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Genenames.org: the HGNC and VGNC resources in 2017

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

The Ensembl gene annotation system

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

TANGO1 and Mia2/cTAGE5 (TALI) cooperate to export bulky pre-chylomicrons/VLDLs from the endoplasmic reticulum

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

The International Nucleotide Sequence Database Collaboration

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Whole-genome sequencing is more powerful than whole-exome sequencing for detecting exome variants

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Whole-Exome Enrichment with the Agilent SureSelect Human All Exon Platform

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Most highly expressed protein-coding genes have a single dominant isoform.

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

High throughput exome coverage of clinically relevant cardiac genes

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Identifying (non-)coding RNAs and small peptides: challenges and opportunities

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

The Vertebrate Genome Annotation browser 10 years on

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Current status and new features of the Consensus Coding Sequence database

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

GENCODE: the reference human genome annotation for The ENCODE Project

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

A quantitative atlas of polyadenylation in five mammals

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Tracking and coordinating an international curation effort for the CCDS Project

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Reduced cholesterol and triglycerides in mice with a mutation in Mia2, a liver protein that localizes to ER exit sites

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Modernizing reference genome assemblies

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Mapping and quantifying mammalian transcriptomes by RNA-Seq

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

The Sequence Ontology: a tool for the unification of genome annotations

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5753299

24 May 2018

Identifiers

DOI

10.1093/NAR/GKX1031

1 reference

8 January 2018

journals/nar/PujarOFLMWGDBBB18

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

8 January 2018

1 reference

8 January 2018