(Q47104752)

8 January 2018

title

PDBsum: Structural summaries of PDB entries (English)

1 reference

8 January 2018

author

Roman A. Laskowski

1

1 reference

8 January 2018

Lukáš Pravda

3

1 reference

8 January 2018

Radka Svobodová Vařeková

4

object named as

Radka Svobodová Vařeková

0 references

Janet Thornton

object named as

Janet M Thornton

5

0 references

author name string

Jagoda Jabłońska

2

1 reference

8 January 2018

publication date

5 September 2017

1 reference

8 January 2018

published in

Protein Science

1 reference

8 January 2018

volume

27

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8 January 2018

issue

1

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8 January 2018

page(s)

129-134

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8 January 2018

A novel bifunctional transcriptional regulator of riboflavin metabolism in Archaea

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23 May 2018

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23 May 2018

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The Pfam protein families database: towards a more sustainable future

23 May 2018

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PDBe: improved accessibility of macromolecular structure data from PDB and EMDB

23 May 2018

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3Dmol.js: molecular visualization with WebGL.

23 May 2018

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ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank

23 May 2018

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CATH: comprehensive structural and functional annotations for genome sequences.

23 May 2018

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MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes

23 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

SCOP2 prototype: a new approach to protein structure mining

23 May 2018

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DrugBank 4.0: shedding new light on drug metabolism

23 May 2018

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23 May 2018

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MOLE 2.0: advanced approach for analysis of biomacromolecular channels

23 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

SIFTS: Structure Integration with Function, Taxonomy and Sequences resource

23 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

Biomolecules in the computer: Jmol to the rescue

23 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

ArchSchema: a tool for interactive graphing of related Pfam domain architectures

23 May 2018

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23 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

ProFunc: a server for predicting protein function from 3D structure

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

STRAP: editor for STRuctural Alignments of Proteins

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

PDBsum: summaries and analyses of PDB structures

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

23 May 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

PDBsum: a Web-based database of summaries and analyses of all PDB structures

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

NUCPLOT: a program to generate schematic diagrams of protein-nucleic acid interactions

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

CATH--a hierarchic classification of protein domain structures

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

Protein clefts in molecular recognition and function

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

Image library of biological macromolecules.

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

PROMOTIF--a program to identify and analyze structural motifs in proteins

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

SURFNET: a program for visualizing molecular surfaces, cavities, and intermolecular interactions

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

Satisfying hydrogen bonding potential in proteins

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

SCOP: a structural classification of proteins database for the investigation of sequences and structures

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

PDBbrowse--a graphics interface to the Brookhaven Protein Data Bank

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

RASMOL: biomolecular graphics for all

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

HERA--a program to draw schematic diagrams of protein secondary structures

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

Rapid and sensitive sequence comparison with FASTP and FASTA

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

The Protein Data Bank: a computer-based archival file for macromolecular structures

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

Sequences annotated by structure: a tool to facilitate the use of structural information in sequence analysis

23 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734310

The Swiss-3DImage collection and PDB-Browser on the World-Wide Web

15 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FPRO.3289

PROCHECK: a program to check the stereochemical quality of protein structures

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FPRO.3289

21 January 2018

Identifiers

DOI

10.1002/PRO.3289

1 reference

8 January 2018

PMC publication ID

5734310

1 reference

8 January 2018

PubMed publication ID

28875543

1 reference

8 January 2018