(Q47177146)

11 January 2018

title

A global analysis of adaptive evolution of operons in cyanobacteria (English)

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11 January 2018

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Danish Memon

1

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11 January 2018

Abhay K Singh

series ordinal

2

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11 January 2018

Himadri B Pakrasi

series ordinal

3

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11 January 2018

Pramod P Wangikar

series ordinal

4

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11 January 2018

publication date

18 September 2012

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11 January 2018

number of pages

16

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based on heuristic

inferred from page(s)

published in

Antonie van Leeuwenhoek

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11 January 2018

volume

103

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11 January 2018

issue

2

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11 January 2018

page(s)

331-346

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11 January 2018

https://scigraph.springernature.com/pub.10.1007/s10482-012-9813-0

exact match

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cites work

Transcription of the extended hyp-operon in Nostoc sp. strain PCC 7120.

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Operon prediction for sequenced bacterial genomes without experimental information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

A Bayesian network approach to operon prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Predicting bacterial transcription units using sequence and expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The relative value of operon predictions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Operon prediction by comparative genomics: an application to the Synechococcus sp. WH8102 genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Operon prediction using both genome-specific and general genomic information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Conservation of gene order: a fingerprint of proteins that physically interact

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Prediction of transcriptional terminators in Bacillus subtilis and related species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

MicrobesOnline: an integrated portal for comparative and functional genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Accelerated evolution associated with genome reduction in a free-living prokaryote

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

A universally applicable method of operon map prediction on minimally annotated genomes using conserved genomic context

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Prediction of operons in microbial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Comparative methods with sampling error and within-species variation: contrasts revisited and revised

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Who's your neighbor? New computational approaches for functional genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Protein signatures (molecular synapomorphies) that are distinctive characteristics of the major cyanobacterial clades

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Signature proteins for the major clades of Cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Exploitation of gene context

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Genetic regulatory mechanisms in the synthesis of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

A fuzzy guided genetic algorithm for operon prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The distinctive signatures of promoter regions and operon junctions across prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The KEGG databases at GenomeNet

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Patterns and implications of gene gain and loss in the evolution of Prochlorococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Gene Organization: Selection, Selfishness, and Serendipity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

DOOR: a database for prokaryotic operons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Computational genetics: finding protein function by nonhomology methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Fra proteins influencing filament integrity, diazotrophy and localization of septal protein SepJ in the heterocyst-forming cyanobacterium Anabaena sp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

A powerful non-homology method for the prediction of operons in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The cyanobacterial genome core and the origin of photosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

CyanoBase: the cyanobacteria genome database update 2010.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

KEGG: Kyoto Encyclopedia of Genes and Genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

ODB: a database for operon organizations, 2011 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

ODB: a database of operons accumulating known operons across multiple genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The use of gene clusters to infer functional coupling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

A novel method for accurate operon predictions in all sequenced prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Operon formation is driven by co-regulation and not by horizontal gene transfer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The life-cycle of operons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Microarray data normalization and transformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Generic Assignments, Strain Histories and Properties of Pure Cultures of Cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The organization of the bacterial genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Connected gene neighborhoods in prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Congruent evolution of different classes of non-coding DNA in prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Co-expression pattern from DNA microarray experiments as a tool for operon prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Operons in Escherichia coli: genomic analyses and predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Functional annotation of hypothetical proteins - A review

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

The identification of functional modules from the genomic association of genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Genome-wide analysis of light sensing in Prochlorococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Refined phylogenetic profiles method for predicting protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Integrating Markov clustering and molecular phylogenetics to reconstruct the cyanobacterial species tree from conserved protein families.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

A high resolution map of a cyanobacterial transcriptome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

STRING: a database of predicted functional associations between proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Computational identification of operons in microbial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Operon prediction based on SVM

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

Analysis of the Cellular Functions of Escherichia coli Operons and Their Conservation in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10482-012-9813-0

10.1007/S10482-012-9813-0

21 January 2018

Identifiers

DOI

1 reference

11 January 2018

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11 January 2018