(Q47718169)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

title

FuncPatch: a web server for the fast Bayesian inference of conserved functional patches in protein 3D structures (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

0 references

1 reference

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

author name string

G Brian Golding

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

language of work or name

English

0 references

publication date

15 October 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

volume

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

page(s)

523-531

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

21 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF- effectors

21 January 2018

1 reference

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Tertiary Windowing to Detect Positive Diversifying Selection

21 January 2018

1 reference

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Activation mechanism of the MAP kinase ERK2 by dual phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Predicting functionally important residues from sequence conservation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Bio++: a set of C++ libraries for sequence analysis, phylogenetics, molecular evolution and population genetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Evolutionary trees from DNA sequences: A maximum likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures

21 January 2018

1 reference

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Bio++: efficient extensible libraries and tools for computational molecular evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Phylogenetic Gaussian process model for the inference of functionally important regions in protein tertiary structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

A likelihood ratio test for evolutionary rate shifts and functional divergence among proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Three-dimensional cluster analysis identifies interfaces and functional residue clusters in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Comparison of site-specific rate-inference methods for protein sequences: empirical Bayesian methods are superior

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

X-ray and NMR structure of human Bcl-xL, an inhibitor of programmed cell death

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

In silico identification of functional regions in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Prediction of functional sites by analysis of sequence and structure conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Database resources of the National Center for Biotechnology Information

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Calmodulin differentially modulates Smad1 and Smad2 signaling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

ROCR: visualizing classifier performance in R

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

The Bioperl toolkit: Perl modules for the life sciences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

How mitogen-activated protein kinases recognize and phosphorylate their targets: A QM/MM study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Atomic structure of the MAP kinase ERK2 at 2.3 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Algorithm 778: L-BFGS-B: Fortran subroutines for large-scale bound-constrained optimization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Inferring sequence regions under functional divergence in duplicate genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU673

Fast and Scriptable Molecular Graphics in Web Browsers without Java3D

21 January 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/citations/10.1038/NPRE.2007.50.1

Identifiers

DOI

10.1093/BIOINFORMATICS/BTU673

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25322839%20AND%20SRC:MED&resulttype=core&format=json

journals/bioinformatics/HuangG15

21 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference