(Q47745452)

5 February 2018

title

BAR expressolog identification: expression profile similarity ranking of homologous genes in plant species (English)

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4

Nicholas J Provart

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5 February 2018

author name string

Rohan V Patel

series ordinal

1

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5 February 2018

Hardeep K Nahal

series ordinal

2

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5 February 2018

Robert Breit

series ordinal

3

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5 February 2018

publication date

12 July 2012

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5 February 2018

published in

The Plant Journal

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5 February 2018

volume

71

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issue

6

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5 February 2018

page(s)

1038-1050

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5 February 2018

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

A gene expression atlas of the model legume Medicago truncatula.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Assessing performance of orthology detection strategies applied to eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Accurate quantification of functional analogy among close homologs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Gene-expression profile comparisons distinguish seven organs of maize

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Distinguishing Homologous from Analogous Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Bioconductor: open software development for computational biology and bioinformatics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

An international bioinformatics infrastructure to underpin the Arabidopsis community

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Ancestral polyploidy in seed plants and angiosperms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

The quest for orthologs: finding the corresponding gene across genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Genome-wide gene expression profiling reveals conserved and novel molecular functions of the stigma in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

The developmental dynamics of the maize leaf transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Gramene: a growing plant comparative genomics resource

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Complete transcriptome of the soybean root hair cell, a single-cell model, and its alteration in response to Bradyrhizobium japonicum infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

How to usefully compare homologous plant genes and chromosomes as DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

OrfPredictor: predicting protein-coding regions in EST-derived sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Comparative network analysis reveals that tissue specificity and gene function are important factors influencing the mode of expression evolution in Arabidopsis and rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

GeneCAT--novel webtools that combine BLAST and co-expression analyses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

PlaNet: combined sequence and expression comparisons across plant networks derived from seven species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

PLAZA: a comparative genomics resource to study gene and genome evolution in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

A gene expression map of Arabidopsis thaliana development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Genome sequence of the palaeopolyploid soybean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Genome-wide atlas of transcription during maize development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

A genomic perspective on protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

The COG database: an updated version includes eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Co-expression tools for plant biology: opportunities for hypothesis generation and caveats

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Expansion and diversification of the Populus R2R3-MYB family of transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Genotype and time of day shape the Populus drought response

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Time of day shapes Arabidopsis drought transcriptomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

An atlas of gene expression from seed to seed through barley development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-313X.2012.05055.X

10.1111/J.1365-313X.2012.05055.X

21 January 2018

Identifiers

DOI

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5 February 2018

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5 February 2018