(Q47745576)

English

Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan.

scientific article

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scholarly article

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan. (English)

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Bifidobacterium longum

object named as

Bifidobacterium longum

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

Douwe van Sinderen

8

object named as

Douwe van Sinderen

1 reference

Europe PubMed Central

5 February 2018

Francesca Bottacini

object named as

Francesca Bottacini

2

0 references

author name string

Toshitaka Odamaki

1

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Kumiko Kato

3

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Eri Mitsuyama

4

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Keisuke Yoshida

5

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Ayako Horigome

6

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Jin-Zhong Xiao

7

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

language of work or name

0 references

publication date

8 January 2018

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Scientific Reports

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

8

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

1

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

85

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

copyright license

Creative Commons Attribution 4.0 International

8 January 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

https://scigraph.springernature.com/pub.10.1038/s41598-017-18391-x

0 references

Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Bifidobacterium breve UCC2003 metabolises the human milk oligosaccharides lacto-N-tetraose and lacto-N-neo-tetraose through overlapping, yet distinct pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The type VII secretion system of Staphylococcus aureus secretes a nuclease toxin that targets competitor bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Bifidobacteria and Their Role as Members of the Human Gut Microbiota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Age-related changes in gut microbiota composition from newborn to centenarian: a cross-sectional study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Type VII Secretion: A Highly Versatile Secretion System

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Strain-level microbial epidemiology and population genomics from shotgun metagenomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

In silico dissection of Type VII Secretion System components across bacteria: New directions towards functional characterization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Sialylated Milk Oligosaccharides Promote Microbiota-Dependent Growth in Models of Infant Undernutrition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

A Comprehensive tRNA Genomic Survey Unravels the Evolutionary History of tRNA Arrays in Prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Genomics of the Genus Bifidobacterium Reveals Species-Specific Adaptation to the Glycan-Rich Gut Environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Pangenome analysis of Bifidobacterium longum and site-directed mutagenesis through by-pass of restriction-modification systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The ecology of microscopic life in household dust

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Intraspecies Genomic Diversity and Long-Term Persistence of Bifidobacterium longum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Comparative Genomics Revealed Genetic Diversity and Species/Strain-Level Differences in Carbohydrate Metabolism of Three Probiotic Bifidobacterial Species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Exploring Vertical Transmission of Bifidobacteria from Mother to Child

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Occurrence and Diversity of CRISPR-Cas Systems in the Genus Bifidobacterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Subspeciation of Bifidobacterium longum by multilocus approaches and amplified fragment length polymorphism: Description of B. longum subsp. suillum subsp. nov., isolated from the faeces of piglets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The impact of diet and lifestyle on gut microbiota and human health

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Intestinal microbiota in health and disease: role of bifidobacteria in gut homeostasis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Discovery of a conjugative megaplasmid in Bifidobacterium breve.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Longitudinal analysis of microbial interaction between humans and the indoor environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Bifidobacterium longum subsp. longum Exo-β-1,3-Galactanase, an enzyme for the degradation of type II arabinogalactan

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Mother-to-infant transmission of intestinal bifidobacterial strains has an impact on the early development of vaginally delivered infant's microbiota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Long-term temporal analysis of the human fecal microbiota revealed a stable core of dominant bacterial species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Mobilome and genetic modification of bifidobacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Genomic variation landscape of the human gut microbiome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Host-microbe interactions that facilitate gut colonization by commensal bifidobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The Pfam protein families database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Transmission of intestinal Bifidobacterium longum subsp. longum strains from mother to infant, determined by multilocus sequencing typing and amplified fragment length polymorphism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Bifidobacteria can protect from enteropathogenic infection through production of acetate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Exploring the diversity of the bifidobacterial population in the human intestinal tract

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Genome-scale analyses of health-promoting bacteria: probiogenomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Molecular characterization of hsp20, encoding a small heat shock protein of bifidobacterium breve UCC2003

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Peptide signal molecules and bacteriocins in Gram-negative bacteria: a genome-wide in silico screening for peptides containing a double-glycine leader sequence and their cognate transporters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Mauve: multiple alignment of conserved genomic sequence with rearrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Quantitative PCR with 16S rRNA-gene-targeted species-specific primers for analysis of human intestinal bifidobacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

The COG database: an updated version includes eukaryotes

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22 May 2018

An efficient algorithm for large-scale detection of protein families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Oligosaccharides in human milk: structural, functional, and metabolic aspects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Eukaryotic signalling domain homologues in archaea and bacteria. Ancient ancestry and horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

22 May 2018

Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5758520

14 August 2018

A GntR-type transcriptional repressor controls sialic acid utilization in Bifidobacterium breve UCC2003

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-18391-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Influence of maternal bifidobacteria on the establishment of bifidobacteria colonizing the gut in infants

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-18391-X

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1038/S41598-017-18391-X

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

Academia.edu publication ID

1 reference

https://www.academia.edu/68117720/Genomic_diversity_and_distribution_of_Bifidobacterium_longum_subsp_longum_across_the_human_lifespan

(PDF) Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan | Douwe Van Sinderen - Academia.edu (undetermined language)

10 October 2022

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

1 reference

Europe PubMed Central

5 February 2018

http://europepmc.org/abstract/PMC/5758520

ResearchGate publication ID

1 reference

https://www.researchgate.net/publication/322315879_Genomic_diversity_and_distribution_of_Bifidobacterium_longum_subsp_longum_across_the_human_lifespan

(PDF) Genomic diversity and distribution of Bifidobacterium longum subsp. longum across the human lifespan (English)

10 October 2022

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