(Q48039488)

English

Analysis of nucleotide diversity among alleles of the major bacterial blight resistance gene Xa27 in cultivars of rice (Oryza sativa) and its wild relatives

scientific article published on 8 May 2013

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Analysis of nucleotide diversity among alleles of the major bacterial blight resistance gene Xa27 in cultivars of rice (Oryza sativa) and its wild relatives (English)

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

0 references

author name string

Waikhom Bimolata

1

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Anirudh Kumar

2

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Raman Meenakshi Sundaram

3

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Gouri Shankar Laha

4

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Insaf Ahmed Qureshi

5

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Gajjala Ashok Reddy

6

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

Irfan Ahmad Ghazi

7

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

publication date

8 May 2013

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

238

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

2

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

293-305

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

https://scigraph.springernature.com/pub.10.1007/s00425-013-1891-3

0 references

Basic local alignment search tool

1 reference

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Low levels of polymorphism in genes that control the activation of defense response in Arabidopsis thaliana

1 reference

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Evolutionary dynamics of plant R-genes

1 reference

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TOPCONS: consensus prediction of membrane protein topology

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Heterogeneous evolutionary processes affect R gene diversity in natural populations of Solanum pimpinellifolium

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Multiple sequence alignment with hierarchical clustering

1 reference

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Nucleotide sequence diversity at the alcohol dehydrogenase 1 locus in wild barley (Hordeum vulgare ssp. spontaneum): an evaluation of the background selection hypothesis

1 reference

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Large-scale search for genes on which positive selection may operate

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High-resolution genetic mapping of Xa27(t), a new bacterial blight resistance gene in rice, Oryza sativa L.

1 reference

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21 January 2018

R gene expression induced by a type-III effector triggers disease resistance in rice

1 reference

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21 January 2018

Molecular evolution of the Pi-ta gene resistant to rice blast in wild rice (Oryza rufipogon)

1 reference

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Addition of transcription activator-like effector binding sites to a pathogen strain-specific rice bacterial blight resistance gene makes it effective against additional strains and against bacterial leaf streak

1 reference

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21 January 2018

Nucleotide polymorphism in the acidic chitinase locus (ChiA) region of the wild plant Arabidopsis thaliana

1 reference

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21 January 2018

Naturally occurring genetic variation in Arabidopsis thaliana.

1 reference

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21 January 2018

Multiple genetic processes result in heterogeneous rates of evolution within the major cluster disease resistance genes in lettuce

1 reference

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Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm

1 reference

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21 January 2018

Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

21 January 2018

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

21 January 2018

Receptor-like genes in the major resistance locus of lettuce are subject to divergent selection

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

21 January 2018

Mathematical model for studying genetic variation in terms of restriction endonucleases

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

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SignalP 4.0: discriminating signal peptides from transmembrane regions

1 reference

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A single plant resistance gene promoter engineered to recognize multiple TAL effectors from disparate pathogens

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The maintenance of extreme amino acid diversity at the disease resistance gene, RPP13, in Arabidopsis thaliana

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21 January 2018

Natural variation in the Pto disease resistance gene within species of wild tomato (Lycopersicon). II. Population genetics of Pto.

1 reference

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Ab initio gene finding in Drosophila genomic DNA

1 reference

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21 January 2018

Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis.

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

21 January 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

21 January 2018

Genomic variation in rice: genesis of highly polymorphic linkage blocks during domestication

1 reference

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://api.crossref.org/works/10.1007%2FS00425-013-1891-3

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Molecular evolution of plant immune system genes.

1 reference

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21 January 2018

Xa21D encodes a receptor-like molecule with a leucine-rich repeat domain that determines race-specific recognition and is subject to adaptive evolution

1 reference

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On the number of segregating sites in genetical models without recombination

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DNA polymorphism in the blast disease resistance gene Pita of the wild rice Oryza rufipogon and its related species

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Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice

1 reference

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Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

1 reference

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Statistical tests of neutrality of mutations

1 reference

https://pubmed.ncbi.nlm.nih.gov/23652799

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based on heuristic

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Transcription activator-like type III effector AvrXa27 depends on OsTFIIAgamma5 for the activation of Xa27 transcription in rice that triggers disease resistance to Xanthomonas oryzae pv. oryzae

1 reference

https://pubmed.ncbi.nlm.nih.gov/23652799

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heterogeneous geographic patterns of nucleotide sequence diversity between two alcohol dehydrogenase genes in wild barley (Hordeum vulgare subspecies spontaneum).

1 reference

https://pubmed.ncbi.nlm.nih.gov/23652799

12 December 2020

based on heuristic

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Comparative RFLP mapping of an allotetraploid wild rice species (Oryza latifolia) and cultivated rice (O. sativa)

1 reference

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Analysis of 142 genes resolves the rapid diversification of the rice genus

1 reference

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inferred from PubMed ID database lookup

Genetic variation for disease resistance and tolerance among Arabidopsis thaliana accessions

1 reference

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Analysis of collinear regions of Oryza AA and CC genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/23652799

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inferred from PubMed ID database lookup

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

https://pubmed.ncbi.nlm.nih.gov/23652799

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inferred from PubMed ID database lookup

Natural selection for polymorphism in the disease resistance gene Rps2 of Arabidopsis thaliana.

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00425-013-1891-3

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23652799

ResearchGate publication ID

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