(Q48089439)

English

FlgM anti-sigma factors: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships

scientific article published on 4 May 2006

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Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

FlgM anti-sigma factors: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships (English)

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

1

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

Fabrizio Ceciliani

object named as

F Ceciliani

3

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author name string

B González

2

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

A Galizzi

4

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

publication date

4 May 2006

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

Journal of Molecular Modeling

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

12

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

6

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

973-983

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

Comparison of sequence profiles. Strategies for structural predictions using sequence information

1 reference

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21 January 2018

What is the value added by human intervention in protein structure prediction?

1 reference

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21 January 2018

The GROMOS Biomolecular Simulation Program Package

1 reference

https://api.crossref.org/works/10.1007%2FS00894-005-0096-5

21 January 2018

Overproduction and characterization of the Bacillus subtilis anti-sigma factor FlgM.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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WHAT IF: a molecular modeling and drug design program

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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Comparison of helix interactions in membrane and soluble alpha-bundle proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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Regulation of flagellar assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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The C-terminal half of the anti-sigma factor, FlgM, becomes structured when bound to its target, σ28

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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Anti-sigma factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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3D-Jury: a simple approach to improve protein structure predictions

1 reference

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12 December 2020

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ORFeus: Detection of distant homology using sequence profiles and predicted secondary structure

1 reference

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12 December 2020

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Functional characterization of the antagonistic flagellar late regulators FliA and FlgM of Helicobacter pylori and their effects on the H. pylori transcriptome

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of FlgM in sigma D-dependent gene expression in Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular dissection of the flagellum-specific anti-sigma factor, FlgM, of Salmonella typhimurium

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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UCSF Chimera--a visualization system for exploratory research and analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pcons: a neural-network-based consensus predictor that improves fold recognition.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

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based on heuristic

inferred from PubMed ID database lookup

ClusPro: an automated docking and discrimination method for the prediction of protein complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

JPred: a consensus secondary structure prediction server

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The flagellar anti-sigma factor FlgM actively dissociates Salmonella typhimurium sigma28 RNA polymerase holoenzyme.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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GenTHREADER: an efficient and reliable protein fold recognition method for genomic sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Practical limits of function prediction

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced genome annotation using structural profiles in the program 3D-PSSM

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Vibrio cholerae FlgM homologue is an anti-sigma28 factor that is secreted through the sheathed polar flagellum

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The novel sigma54- and sigma28-dependent flagellar gene transcription hierarchy of Vibrio cholerae

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution structure and stability of the anti-sigma factor AsiA: implications for novel functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improving the quality of twilight-zone alignments

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel transcriptional regulation mechanism in the flagellar regulon of Salmonella typhimurium: an antisigma factor inhibits the activity of the flagellum-specific sigma factor, sigma F

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and functional characterization of flgM, a gene encoding the anti-sigma 28 factor in Pseudomonas aeruginosa

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

FlgM gains structure in living cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A method to predict functional residues in proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recognition of errors in three-dimensional structures of proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of the flagellar sigma/anti-sigma complex sigma(28)/FlgM reveals an intact sigma factor in an inactive conformation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A multipartite interaction between Salmonella transcription factor sigma28 and its anti-sigma factor FlgM: implications for sigma28 holoenzyme destabilization through stepwise binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Homology modeling with low sequence identity

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coupling of flagellar gene expression to flagellar assembly in Salmonella enterica serovar typhimurium and Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

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based on heuristic

inferred from PubMed ID database lookup

Protein docking using continuum electrostatics and geometric fit

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

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based on heuristic

inferred from PubMed ID database lookup

Errors in protein structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

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based on heuristic

inferred from PubMed ID database lookup

SWISS-MODEL: An automated protein homology-modeling server

1 reference

https://pubmed.ncbi.nlm.nih.gov/16673084

12 December 2020

based on heuristic

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3D‐SHOTGUN: A novel, cooperative, fold‐recognition meta‐predictor

1 reference

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based on heuristic

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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Structure prediction meta server

1 reference

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Identifiers

10.1007/S00894-005-0096-5

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 February 2018

http://europepmc.org/abstract/MED/16673084

ResearchGate publication ID

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