(Q50554934)

15 March 2018

title

DNA methylation profiles define stem cell identity and reveal a tight embryonic-extraembryonic lineage boundary. (English)

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15 March 2018

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2

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Claire E Senner

1

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author name string

David Oxley

series ordinal

3

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15 March 2018

Simon Andrews

series ordinal

4

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publication date

1 December 2012

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15 March 2018

published in

Stem Cells

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15 March 2018

volume

30

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issue

12

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15 March 2018

page(s)

2732-2745

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15 March 2018

Blastocyst lineage formation, early embryonic asymmetries and axis patterning in the mouse

cites work

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Troika of the mouse blastocyst: lineage segregation and stem cells

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Making a firm decision: multifaceted regulation of cell fate in the early mouse embryo

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Stem cells and lineage development in the mammalian blastocyst

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Making a commitment: cell lineage allocation and axis patterning in the early mouse embryo

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Establishment in culture of pluripotential cells from mouse embryos

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Promotion of trophoblast stem cell proliferation by FGF4

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Derivation of pluripotent epiblast stem cells from mammalian embryos

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New cell lines from mouse epiblast share defining features with human embryonic stem cells

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The endoderm of the mouse embryo arises by dynamic widespread intercalation of embryonic and extraembryonic lineages

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Formation of germ-line chimaeras from embryo-derived teratocarcinoma cell lines

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Dynamic reprogramming of DNA methylation in the early mouse embryo.

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Stability and flexibility of epigenetic gene regulation in mammalian development

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Epigenetic restriction of embryonic cell lineage fate by methylation of Elf5.

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Dynamic equilibrium and heterogeneity of mouse pluripotent stem cells with distinct functional and epigenetic states

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Disruption of a conserved region of Xist exon 1 impairs Xist RNA localisation and X-linked gene silencing during random and imprinted X chromosome inactivation

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Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

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Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

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Dicer regulates Xist promoter methylation in ES cells indirectly through transcriptional control of Dnmt3a

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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

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The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

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Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification

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Tet1 and Tet2 regulate 5-hydroxymethylcytosine production and cell lineage specification in mouse embryonic stem cells

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Tet1 is dispensable for maintaining pluripotency and its loss is compatible with embryonic and postnatal development

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DNA methylation regulates long-range gene silencing of an X-linked homeobox gene cluster in a lineage-specific manner

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Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

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Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

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A novel CpG island set identifies tissue-specific methylation at developmental gene loci

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Orphan CpG islands identify numerous conserved promoters in the mammalian genome

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CpG islands and the regulation of transcription

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Bio-CAP: a versatile and highly sensitive technique to purify and characterise regions of non-methylated DNA

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Distinct histone modifications in stem cell lines and tissue lineages from the early mouse embryo

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Difference between random and imprinted X inactivation in common voles.

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Loss of Atrx affects trophoblast development and the pattern of X-inactivation in extraembryonic tissues

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An X-linked GFP transgene reveals unexpected paternal X-chromosome activity in trophoblastic giant cells of the mouse placenta.

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Ring1B and Suv39h1 delineate distinct chromatin states at bivalent genes during early mouse lineage commitment

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Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

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The DNA methyltransferases of mammals

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Human DNA methylomes at base resolution show widespread epigenomic differences

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Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes

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Conserved role of intragenic DNA methylation in regulating alternative promoters

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Recognition of CpG island chromatin by KDM2A requires direct and specific interaction with linker DNA.

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Cell type-specific DNA methylation at intragenic CpG islands in the immune system.

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Dynamic transition of Dnmt3b expression in mouse pre- and early post-implantation embryos

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Ras-MAPK signaling promotes trophectoderm formation from embryonic stem cells and mouse embryos

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DNA methylation is dispensable for the growth and survival of the extraembryonic lineages.

21 January 2018

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GC-rich sequence elements recruit PRC2 in mammalian ES cells

21 January 2018

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Polycomb complexes repress developmental regulators in murine embryonic stem cells

21 January 2018

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

21 January 2018

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Chromatin signatures of pluripotent cell lines

21 January 2018

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Preferential inactivation of the paternally derived X chromosome in the extraembryonic membranes of the mouse

21 January 2018

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Extra-embryonic-specific imprinted expression is restricted to defined lineages in the post-implantation embryo.

21 January 2018

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An early developmental role for miRNAs in the maintenance of extraembryonic stem cells in the mouse embryo

21 January 2018

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The primitive endoderm lineage of the mouse blastocyst: sequential transcription factor activation and regulation of differentiation by Sox17.

21 January 2018

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X Inactivation in the Mouse Embryo Deficient for Dnmt1: Distinct Effect of Hypomethylation on Imprinted and Random X Inactivation

21 January 2018

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Cell lineage-specific undermethylation of mouse repetitive DNA

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/STEM.1249

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15 March 2018

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15 March 2018