(Q51072404)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

title

A multiscale approach to predicting affinity changes in protein-protein interfaces (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

author name string

Daniel F A R Dourado

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

language of work or name

English

0 references

publication date

5 July 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

volume

82

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

page(s)

2681-2690

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24975440%20AND%20SRC:MED&resulttype=core&format=json

Computational alanine scanning of the 1:1 human growth hormone-receptor complex

21 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Role of conformational sampling in computing mutation-induced changes in protein structure and stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Q: a molecular dynamics program for free energy calculations and empirical valence bond simulations in biomolecular systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

BeAtMuSiC: Prediction of changes in protein-protein binding affinity on mutations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

mCSM: predicting the effects of mutations in proteins using graph-based signatures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Computational design of antibody-affinity improvement beyond in vivo maturation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Modeling the structure of mAb 14B7 bound to the anthrax protective antigen.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Accounting for conformational entropy in predicting binding free energies of protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Effects of site-specific amino acid modification on protein interactions and biological function

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

The structural dynamics and energetics of an immunodominant T cell receptor are programmed by its Vbeta domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Experimental and computational analyses of the energetic basis for dual recognition of immunity proteins by colicin endonucleases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Internal coordinates for molecular dynamics and minimization in structure determination and refinement.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Multiscale modeling of macromolecular biosystems

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Fast fitting to low resolution density maps: elucidating large-scale motions of the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

A new method for modeling large-scale rearrangements of protein domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Modeling and design by hierarchical natural moves

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Development and testing of a general amber force field

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

High‐Temperature Equation of State by a Perturbation Method. I. Nonpolar Gases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Evaluation of protein-protein association energies by free energy perturbation calculations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

A simple physical model for binding energy hot spots in protein-protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

A new generation of statistical potentials for proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

ICM?A new method for protein modeling and design: Applications to docking and structure prediction from the distorted native conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Intermolecular Contact Potentials for Protein-Protein Interactions Extracted from Binding Free Energy Changes upon Mutation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Computational analysis of binding of P1 variants to trypsin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Probing the effect of point mutations at protein-protein interfaces with free energy calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Fast flexible modeling of RNA structure using internal coordinates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

SKEMPI: a Structural Kinetic and Energetic database of Mutant Protein Interactions and its use in empirical models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Predicting the Impact of Missense Mutations on Protein-Protein Binding Affinity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

A kinematic view of loop closure

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634

Unravelling Hot Spots: a comprehensive computational mutagenesis study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.24634