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Chapter 6. Qualitative and quantitative assessment of the activity of the yeast nonsense-mediated mRNA decay pathway.
scientific article published in January 2008
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1 reference
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Europe PubMed Central
PubMed publication ID
19215756
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
title
Chapter 6. Qualitative and quantitative assessment of the activity of the yeast nonsense-mediated mRNA decay pathway
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
author
Marcus J.O. Johansson
series ordinal
3
1 reference
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Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
author name string
Feng He
series ordinal
1
1 reference
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Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
Nadia Amrani
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2
1 reference
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Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
Allan Jacobson
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4
1 reference
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Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
language of work or name
English
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publication date
1 January 2008
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
published in
Methods in Enzymology
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
volume
449
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
page(s)
127-147
1 reference
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Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
cites work
A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Early nonsense: mRNA decay solves a translational problem
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Primer extension analysis of RNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Conversion of 48S translation preinitiation complexes into 80S initiation complexes as revealed by toeprinting.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Assembly of 48S translation initiation complexes from purified components with mRNAs that have some base pairing within their 5' untranslated regions.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of a novel component of the nonsense-mediated mRNA decay pathway by use of an interacting protein screen
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Upf1p, Nmd2p, and Upf3p regulate the decapping and exonucleolytic degradation of both nonsense-containing mRNAs and wild-type mRNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification and comparison of stable and unstable mRNAs in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Primer extension analysis of eukaryotic ribosome-mRNA complexes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Gene products that promote mRNA turnover in Saccharomyces cerevisiae
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Linking mRNA turnover and translation: assessing the polyribosomal association of mRNA decay factors and degradative intermediates.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Premature translational termination triggers mRNA decapping
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Genetic and biochemical characterization of mutations in the ATPase and helicase regions of the Upf1 protein
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification and characterization of mutations in the UPF1 gene that affect nonsense suppression and the formation of the Upf protein complex but not mRNA turnover
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902406-3
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0076-6879(08)02406-3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
PubMed publication ID
19215756
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19215756
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19215756%20AND%20SRC:MED&resulttype=core&format=json
retrieved
21 January 2020
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