(Q51890636)

17 April 2018

title

Reference energy extremal optimization: a stochastic search algorithm applied to computational protein design. (English)

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17 April 2018

main subject

protein design

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computational biology

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Naigong Zhang

1

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17 April 2018

Chen Zeng

series ordinal

2

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17 April 2018

publication date

1 August 2008

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17 April 2018

Journal of Computational Chemistry

published in

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17 April 2018

volume

29

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17 April 2018

issue

11

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17 April 2018

page(s)

1762-1771

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17 April 2018

De novo protein design: fully automated sequence selection

cites work

1 reference

Design of a Novel Globular Protein Fold with Atomic-Level Accuracy

21 January 2018

1 reference

Computational design of a biologically active enzyme

21 January 2018

1 reference

Advances in computational protein design

21 January 2018

1 reference

Computer-based design of novel protein structures

21 January 2018

1 reference

Bayesian statistical analysis of protein side-chain rotamer preferences

21 January 2018

1 reference

Protein design is NP-hard

21 January 2018

1 reference

Efficient rotamer elimination applied to protein side-chains and related spin glasses

21 January 2018

1 reference

Generalized dead-end elimination algorithms make large-scale protein side-chain structure prediction tractable: implications for protein design and structural genomics.

21 January 2018

1 reference

A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins

21 January 2018

1 reference

RosettaDesign server for protein design

21 January 2018

1 reference

Pairwise calculation of protein solvent-accessible surface areas

21 January 2018

1 reference

Fast accurate evaluation of protein solvent exposure.

21 January 2018

1 reference

Effective energy function for proteins in solution

21 January 2018

1 reference

Automatic protein design with all atom force-fields by exact and heuristic optimization

21 January 2018

1 reference

Trading accuracy for speed: A quantitative comparison of search algorithms in protein sequence design

21 January 2018

1 reference

Fast and accurate side-chain topology and energy refinement (FASTER) as a new method for protein structure optimization.

21 January 2018

1 reference

Dramatic performance enhancements for the FASTER optimization algorithm

21 January 2018

1 reference

Theory of protein folding: the energy landscape perspective

21 January 2018

1 reference

7 Computational protein design and discovery

21 January 2018

1 reference

Biased Monte Carlo optimization of protein sequences

21 January 2018

1 reference

The dead-end elimination theorem and its use in protein side-chain positioning

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1002/JCC.20937

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17 April 2018

DBLP publication ID

journals/jcc/ZhangZ08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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17 April 2018