(Q52608951)

4 May 2018

title

Unbiased Strain-Typing of Arbovirus Directly from Mosquitoes Using Nanopore Sequencing: A Field-forward Biosurveillance Protocol. (English)

1 reference

4 May 2018

0 references

1 reference

Nathan D. Burkett-Cadena

5

1 reference

4 May 2018

Jonathan Jacobs

6

1 reference

4 May 2018

Erik M. Blosser

4

object named as

Erik M Blosser

1 reference

4 May 2018

author name string

Joseph A Russell

1

1 reference

4 May 2018

Brittany Campos

2

1 reference

4 May 2018

Jennifer Stone

3

1 reference

4 May 2018

language of work or name

English

0 references

publication date

3 April 2018

1 reference

4 May 2018

published in

Scientific Reports

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4 May 2018

volume

8

1 reference

4 May 2018

issue

1

1 reference

4 May 2018

page(s)

5417

1 reference

4 May 2018

Creative Commons Attribution 4.0 International

copyright license

start time

3 April 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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22 May 2018

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Real-Time DNA Sequencing in the Antarctic Dry Valleys Using the Oxford Nanopore Sequencer

22 May 2018

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Precision Metagenomics: Rapid Metagenomic Analyses for Infectious Disease Diagnostics and Public Health Surveillance

22 May 2018

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A Perspective Study of Koumiss Microbiome by Metagenomics Analysis Based on Single-Cell Amplification Technique

22 May 2018

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Evaluation of Immunoassays and General Biological Indicator Tests for Field Screening of Bacillus anthracis and Ricin.

22 May 2018

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Evaluation of PCR Systems for Field Screening of Bacillus anthracis

22 May 2018

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Forensic SNP Genotyping using Nanopore MinION Sequencing.

22 May 2018

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High diversity of airborne fungi in the hospital environment as revealed by meta-sequencing-based microbiome analysis

22 May 2018

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MinION as part of a biomedical rapidly deployable laboratory

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Metagenomics of Two Severe Foodborne Outbreaks Provides Diagnostic Signatures and Signs of Coinfection Not Attainable by Traditional Methods

22 May 2018

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Centrifuge: rapid and sensitive classification of metagenomic sequences

22 May 2018

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Rapid Detection Strategies for the Global Threat of Zika Virus: Current State, New Hypotheses, and Limitations

22 May 2018

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Mobile real-time surveillance of Zika virus in Brazil

22 May 2018

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Real-time digital pathogen surveillance - the time is now.

22 May 2018

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Culture-Independent Diagnostics for Health Security.

22 May 2018

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Fast and sensitive taxonomic classification for metagenomics with Kaiju

22 May 2018

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The Challenge and Potential of Metagenomics in the Clinic

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Venezuelan Equine Encephalitis Virus Induces Apoptosis through the Unfolded Protein Response Activation of EGR1.

22 May 2018

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Mobile diagnostics in outbreak response, not only for Ebola: a blueprint for a modular and robust field laboratory

22 May 2018

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Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Mercadeo Virus: A Novel Mosquito-Specific Flavivirus from Panama

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Development and validation of an arthropod maceration protocol for zoonotic pathogen detection in mosquitoes and fleas

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Direct multiplexed whole genome sequencing of respiratory tract samples reveals full viral genomic information.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Adapting the mobile laboratory to the changing needs of the Ebolavirus epidemic

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Biodefense Oriented Genomic-Based Pathogen Classification Systems: Challenges and Opportunities

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Poretools: a toolkit for analyzing nanopore sequence data

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Viral metagenomics on animals as a tool for the detection of zoonoses prior to human infection?

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Nanopore-based instruments as biosensors for future planetary missions

22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Kraken: ultrafast metagenomic sequence classification using exact alignments

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Omics approaches in food safety: fulfilling the promise?

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Clinical insights from metagenomic analysis of sputum samples from patients with cystic fibrosis.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Metagenomic frameworks for monitoring antibiotic resistance in aquatic environments

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Enhanced arbovirus surveillance with deep sequencing: Identification of novel rhabdoviruses and bunyaviruses in Australian mosquitoes

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Metagenomics for pathogen detection in public health

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Baseline survey of the anatomical microbial ecology of an important food plant: Solanum lycopersicum (tomato).

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

IRES-driven expression of the capsid protein of the Venezuelan equine encephalitis virus TC-83 vaccine strain increases its attenuation and safety

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Next-generation sequencing: the future of molecular genetics in poultry production and food safety.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Routine use of microbial whole genome sequencing in diagnostic and public health microbiology

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Alphaviruses: population genetics and determinants of emergence

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Identification of GBV-D, a novel GB-like flavivirus from old world frugivorous bats (Pteropus giganteus) in Bangladesh

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Fast and accurate long-read alignment with Burrows-Wheeler transform

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Encephalitic alphaviruses

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

The potential and challenges of nanopore sequencing

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Venezuelan Equine Encephalitis Virus Infection of Cotton Rats

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Serologic evidence of widespread everglades virus activity in dogs, Florida

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Vector infection determinants of Venezuelan equine encephalitis virus reside within the E2 envelope glycoprotein

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

The Natural Occurrence of Venezuelan Equine Encephalitis in the United States

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Human Venezuelan Equine Encephalitis Virus Infection in Florida *

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

Arbovirus studies in south Florida, with emphasis on Venezuelan equine encephalomyelitis virus

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

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22 May 2018

1 reference

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22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

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22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5883038

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1 reference

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QDroid: Mobile Application Quality Analyzer for App Market Curators

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1 reference

https://api.crossref.org/works/10.1038%2FS41598-018-23641-7

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Evolution of Protein Molecules

1 reference

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7 January 2021

10.1038/S41598-018-23641-7

Identifiers

DOI

1 reference

4 May 2018

PMCID

5883038

1 reference

4 May 2018

PubMed ID

29615665

1 reference

4 May 2018