(Q53113316)

2 July 2019

title

Temperature and urea have opposing impacts on polyproline II conformational bias. (English)

1 reference

2 July 2019

1 reference

2

Travis P Schrank

1 reference

2 July 2019

author name string

W Austin Elam

series ordinal

1

1 reference

2 July 2019

Andrew J Campagnolo

series ordinal

3

1 reference

2 July 2019

Vincent J Hilser

series ordinal

4

1 reference

2 July 2019

language of work or name

English

0 references

publication date

27 January 2013

1 reference

2 July 2019

published in

Biochemistry

1 reference

2 July 2019

volume

52

1 reference

2 July 2019

issue

5

1 reference

2 July 2019

page(s)

949-958

1 reference

2 July 2019

A survey of left-handed polyproline II helices

cites work

1 reference

12 December 2020

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

1 reference

12 December 2020

The Protein Data Bank

1 reference

12 December 2020

The importance of being proline: the interaction of proline-rich motifs in signaling proteins with their cognate domains

1 reference

12 December 2020

Comparative genomics of the eukaryotes

1 reference

12 December 2020

Are denatured proteins ever random coils?

1 reference

12 December 2020

Sequence complexity of disordered protein

1 reference

12 December 2020

Intestinal fatty acid binding protein: the folding mechanism as determined by NMR studies

1 reference

12 December 2020

Protein folding from a highly disordered denatured state: the folding pathway of chymotrypsin inhibitor 2 at atomic resolution

1 reference

12 December 2020

NMR and SAXS characterization of the denatured state of the chemotactic protein CheY: implications for protein folding initiation

1 reference

12 December 2020

Persistence of native-like topology in a denatured protein in 8 M urea

1 reference

12 December 2020

Host-guest study of left-handed polyproline II helix formation

1 reference

12 December 2020

Long-range interactions within a nonnative protein

1 reference

12 December 2020

The search for local native-like nucleation centers in the unfolded state of beta -sheet proteins

1 reference

12 December 2020

The effect of the polyproline II (PPII) conformation on the denatured state entropy.

1 reference

12 December 2020

Assembly of Cell Regulatory Systems Through Protein Interaction Domains

1 reference

12 December 2020

The Structure and Function of Proline Recognition Domains

1 reference

12 December 2020

Protein stability in mixed solvents: a balance of contact interaction and excluded volume

1 reference

12 December 2020

Host-guest scale of left-handed polyproline II helix formation.

1 reference

12 December 2020

The structure of fibrous proteins of the collagen-gelatin group

1 reference

12 December 2020

Direct demonstration of structural similarity between native and denatured eglin C.

1 reference

12 December 2020

Thermodynamics of binding to SH3 domains: the energetic impact of polyproline II (PII) helix formation

1 reference

12 December 2020

Analysis of the "thermodynamic information content" of a Homo sapiens structural database reveals hierarchical thermodynamic organization

1 reference

12 December 2020

Thermodynamic mechanism and consequences of the polyproline II (PII) structural bias in the denatured states of proteins

1 reference

12 December 2020

Random-coil behavior and the dimensions of chemically unfolded proteins

1 reference

12 December 2020

Reassessing random-coil statistics in unfolded proteins

1 reference

12 December 2020

The polyproline II conformation in short alanine peptides is noncooperative

1 reference

12 December 2020

Effects of H2O and D2O on polyproline II helical structure

1 reference

12 December 2020

Solvent dependence of PII conformation in model alanine peptides.

1 reference

12 December 2020

A novel method reveals that solvent water favors polyproline II over beta-strand conformation in peptides and unfolded proteins: conditional hydrophobic accessible surface area (CHASA).

1 reference

12 December 2020

Urea promotes polyproline II helix formation: implications for protein denatured states

1 reference

12 December 2020

Reconciling observations of sequence-specific conformational propensities with the generic polymeric behavior of denatured proteins

1 reference

12 December 2020

Predicting the energetics of osmolyte-induced protein folding/unfolding.

1 reference

12 December 2020

Polyproline II propensities from GGXGG peptides reveal an anticorrelation with beta-sheet scales

1 reference

12 December 2020

A statistical thermodynamic model of the protein ensemble

1 reference

12 December 2020

Intrinsic disorder in transcription factors

1 reference

12 December 2020

Why do hubs tend to be essential in protein networks?

1 reference

12 December 2020

What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae?

1 reference

12 December 2020

Dynamically driven protein allostery.

1 reference

12 December 2020

A molecular mechanism for osmolyte-induced protein stability

1 reference

12 December 2020

Intrinsic disorder as a mechanism to optimize allosteric coupling in proteins

1 reference

12 December 2020

Application of the transfer model to understand how naturally occurring osmolytes affect protein stability

1 reference

12 December 2020

Exploring the impact of polyproline II (PII) conformational bias on the binding of peptides to the SEM-5 SH3 domain

1 reference

12 December 2020

Denatured-state energy landscapes of a protein structural database reveal the energetic determinants of a framework model for folding.

1 reference

12 December 2020

The intrinsic conformational propensities of the 20 naturally occurring amino acids and reflection of these propensities in proteins

1 reference

12 December 2020

Function and structure of inherently disordered proteins

1 reference

12 December 2020

Circular dichroism spectrum of peptides in the poly(Pro)II conformation

1 reference

12 December 2020

Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins

1 reference

12 December 2020

Intrinsic propensities of amino acid residues in GxG peptides inferred from amide I' band profiles and NMR scalar coupling constants

1 reference

12 December 2020

Hydrogen bonding progressively strengthens upon transfer of the protein urea-denatured state to water and protecting osmolytes.

1 reference

12 December 2020

The cold denatured state of the C-terminal domain of protein L9 is compact and contains both native and non-native structure

1 reference

12 December 2020

Temperature-dependent structural changes in intrinsically disordered proteins: formation of alpha-helices or loss of polyproline II?

1 reference

12 December 2020

Time-resolved small-angle X-ray scattering study of the folding dynamics of barnase

1 reference

12 December 2020

Populations of the three major backbone conformations in 19 amino acid dipeptides.

1 reference

12 December 2020

A statistical analysis of the PPII propensity of amino acid guests in proline-rich peptides

1 reference

12 December 2020

A comprehensive library of blocked dipeptides reveals intrinsic backbone conformational propensities of unfolded proteins

1 reference

12 December 2020

A propensity scale for type II polyproline helices (PPII): aromatic amino acids in proline-rich sequences strongly disfavor PPII due to proline-aromatic interactions

1 reference

12 December 2020

Rapid measurement of binding constants and heats of binding using a new titration calorimeter

1 reference

12 December 2020

Predominant osmotically active organic solutes in rat and rabbit renal medullas

1 reference

12 December 2020

1 reference

12 December 2020

Counteraction of urea destabilization of protein structure by methylamine osmoregulatory compounds of elasmobranch fishes

1 reference

12 December 2020

New chain conformations of poly(glutamic acid) and polylysine

1 reference

12 December 2020

Circular dichroism of poly-L-proline in an unordered conformation

1 reference

12 December 2020

Proteins in 6-M guanidine hydrochloride. Demonstration of random coil behavior

1 reference

12 December 2020

Spectroscopic Determination of Tryptophan and Tyrosine in Proteins*

1 reference

12 December 2020

‘Molten‐globule state’: a compact form of globular proteins with mobile side‐chains

1 reference

12 December 2020

Alpha-Lactalbumin: compact state with fluctuating tertiary structure?

1 reference

12 December 2020

Structural determinants of peptide-binding orientation and of sequence specificity in SH3 domains

1 reference

12 December 2020

How receptor tyrosine kinases activate Ras.

1 reference

12 December 2020

The structure and function of proline-rich regions in proteins

1 reference

12 December 2020

Left-handed polyproline II helices commonly occur in globular proteins.

1 reference

12 December 2020

The denatured state (the other half of the folding equation) and its role in protein stability.

1 reference

12 December 2020

Modeling unfolded states of peptides and proteins

1 reference

12 December 2020

Modeling unfolded states of proteins and peptides. II. Backbone solvent accessibility

1 reference

12 December 2020

A naturally occurring protective system in urea-rich cells: mechanism of osmolyte protection of proteins against urea denaturation

1 reference

12 December 2020

Left-handed polyproline II helix formation is (very) locally driven.

1 reference

12 December 2020

Identifiers

DOI

10.1021/BI301435P

1 reference

2 July 2019

PMC publication ID

6583902

1 reference

2 July 2019

PubMed publication ID

23350874

1 reference

2 July 2019