(Q53583889)

15 May 2018

title

Substrate determinants for RNA editing and editing complex interactions at a site for full-round U insertion. (English)

1 reference

15 May 2018

Jorge Cruz-Reyes

6

0 references

author name string

Catherine Cifuentes-Rojas

1

1 reference

15 May 2018

Paula Pavia

2

1 reference

15 May 2018

Alfredo Hernandez

3

1 reference

15 May 2018

Daniel Osterwisch

4

1 reference

15 May 2018

Concepcion Puerta

5

1 reference

15 May 2018

language of work or name

English

0 references

publication date

7 December 2006

1 reference

15 May 2018

Journal of Biological Chemistry

number of pages

12

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

15 May 2018

volume

282

1 reference

15 May 2018

issue

7

1 reference

15 May 2018

page(s)

4265-4276

1 reference

15 May 2018

Complex management: RNA editing in trypanosomes

cites work

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Editing machines: the complexities of trypanosome RNA editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Identification of novel components of Trypanosoma brucei editosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RNA editing: a mechanism for gRNA-specified uridylate insertion into precursor mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Mapping contacts between gRNA and mRNA in trypanosome RNA editing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

A deletion site editing endonuclease in Trypanosoma brucei.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

An essential RNase III insertion editing endonuclease in Trypanosoma brucei.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Reconstitution of uridine-deletion precleaved RNA editing with two recombinant enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Identification of candidate mitochondrial RNA editing ligases from Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

An RNA ligase essential for RNA editing and survival of the bloodstream form of Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Distinct functions of two RNA ligases in active Trypanosoma brucei RNA editing complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Compositionally and functionally distinct editosomes in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Annealing of RNA editing substrates facilitated by guide RNA-binding protein gBP21

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Cloning and characterization of two guide RNA-binding proteins from mitochondria of Crithidia fasciculata: gBP27, a novel protein, and gBP29, the orthologue of Trypanosoma brucei gBP21

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

A 100-kD complex of two RNA-binding proteins from mitochondria of Leishmania tarentolae catalyzes RNA annealing and interacts with several RNA editing components

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RNA interference analyses suggest a transcript-specific regulatory role for mitochondrial RNA-binding proteins MRP1 and MRP2 in RNA editing and other RNA processing in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Disruption of a gene encoding a novel mitochondrial DEAD-box protein in Trypanosoma brucei affects edited mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Kinetoplastid RNA-editing-associated protein 1 (REAP-1): a novel editing complex protein with repetitive domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Trypanosoma brucei TBRGG1, a mitochondrial oligo(U)-binding protein that co-localizes with an in vitro RNA editing activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RBP16 stimulates trypanosome RNA editing in vitro at an early step in the editing reaction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Association of guide RNA binding protein gBP21 with active RNA editing complexes in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RNA editing complex interactions with a site for full-round U deletion in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

T. brucei RNA editing: adenosine nucleotides inversely affect U-deletion and U-insertion reactions at mRNA cleavage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Trypanosoma brucei U insertion and U deletion activities co-purify with an enzymatic editing complex but are differentially optimized.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Minimal pre-mRNA substrates with natural and converted sites for full-round U insertion and U deletion RNA editing in trypanosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RNA sequence and base pairing effects on insertion editing in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

The specificity of nucleotide removal during RNA editing in Trypanosoma brucei

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Trypanosome U-deletional RNA editing involves guide RNA-directed endonuclease cleavage, terminal U exonuclease, and RNA ligase activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

In vitro uridine insertion RNA editing mediated by cis-acting guide RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

A mRNA determinant of gRNA-directed kinetoplastid editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Sequence and structural requirements for optimal guide RNA-directed insertional editing within Leishmania tarentolae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of a gRNA bound to its cognate mRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

How an RNA ligase discriminates RNA versus DNA damage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

The geometry of nucleic acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

The double-stranded-RNA-binding motif: interference and much more

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Structural insight into the mechanism of double-stranded RNA processing by ribonuclease III.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Crystallographic and modeling studies of RNase III suggest a mechanism for double-stranded RNA cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

RNA sequence- and shape-dependent recognition by proteins in the ribonucleoprotein particle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Molecular structure of r(GCG)d(TATACGC): a DNA--RNA hybrid helix joined to double helical DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Structural basis of single-stranded RNA recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

Mfold web server for nucleic acid folding and hybridization prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M605554200

21 January 2018

Identifiers

DOI

10.1074/JBC.M605554200

1 reference

15 May 2018

PubMed ID

17158098

1 reference

15 May 2018