(Q54277046)

27 May 2018

title

Analysis of protein mixtures from whole-cell extracts by single-run nanoLC-MS/MS using ultralong gradients. (English)

1 reference

27 May 2018

author name string

Thomas Köcher

1

1 reference

27 May 2018

Peter Pichler

2

1 reference

27 May 2018

Remco Swart

3

1 reference

27 May 2018

Karl Mechtler

4

1 reference

27 May 2018

publication date

12 April 2012

1 reference

27 May 2018

published in

Nature Protocols

1 reference

27 May 2018

volume

7

1 reference

27 May 2018

issue

5

1 reference

27 May 2018

page(s)

882-890

1 reference

27 May 2018

Applying mass spectrometry-based proteomics to genetics, genomics and network biology

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Mass spectrometry for proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Functional organization of the yeast proteome by systematic analysis of protein complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Systems biology of innate immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Mass spectrometry-based functional proteomics: from molecular machines to protein networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Target profiling of small molecules by chemical proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Multidimensional LC separations in shotgun proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Deep and highly sensitive proteome coverage by LC-MS/MS without prefractionation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Automated 20 kpsi RPLC-MS and MS/MS with Chromatographic Peak Capacities of 1000−1500 and Capabilities in Proteomics and Metabolomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Taming the isobaric tagging elephant in the room in quantitative proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Sample preparation and digestion for proteomic analyses using spin filters

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Trypsin cleaves exclusively C-terminal to arginine and lysine residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Principles of electrospray ionization

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Analytical properties of the nanoelectrospray ion source

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

An improved method for tracking and reducing the void volume in nano HPLC-MS with micro trapping columns

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Preventing carryover of peptides and proteins in nano LC-MS separations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Higher-energy C-trap dissociation for peptide modification analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

The ABC's (and XYZ's) of peptide sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Analysis and validation of proteomic data generated by tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Reporting protein identification data: the next generation of guidelines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

False discovery rates of protein identifications: a strike against the two-peptide rule

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

A guided tour of the Trans-Proteomic Pipeline

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

A statistical model for identifying proteins by tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

More than 100,000 detectable peptide species elute in single shotgun proteomics runs but the majority is inaccessible to data-dependent LC-MS/MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Ultra-High-Pressure RPLC Hyphenated to an LTQ-Orbitrap Velos Reveals a Linear Relation between Peak Capacity and Number of Identified Peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Quality control in LC-MS/MS

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

High-Efficiency Nanoscale Liquid Chromatography Coupled On-Line with Mass Spectrometry Using Nanoelectrospray Ionization for Proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

The impact of systems approaches on biological problems in drug discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

IPPC '99. Proceedings of the 1st Pacific Rim 2-DE Meeting. Tokyo, Japan, August 29-September 1, 1999

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2012.036

Simplification of complex peptide mixtures for proteomic analysis: reversible biotinylation of cysteinyl peptides

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22498708

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NPROT.2012.036

1 reference

27 May 2018

Dimensions Publication ID

1043685051

0 references

1 reference

27 May 2018