(Q54402482)

29 May 2018

title

A short splicing isoform of HBS1L links the cytoplasmic exosome and SKI complexes in humans. (English)

1 reference

29 May 2018

8

Andrzej Dziembowski

1 reference

29 May 2018

7

Katarzyna Kowalska

1 reference

29 May 2018

4

Dominik Cysewski

1 reference

29 May 2018

3

Rafał Tomecki

1 reference

29 May 2018

5

Zbigniew Pietras

1 reference

29 May 2018

2

Tomasz M Kuliński

1 reference

29 May 2018

Katarzyna Kalisiak

1

1 reference

29 May 2018

Aleksander Chlebowski

series ordinal

6

1 reference

29 May 2018

language of work or name

English

0 references

publication date

1 February 2017

1 reference

29 May 2018

published in

Nucleic Acids Research

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29 May 2018

volume

45

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29 May 2018

page(s)

2068-2080

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29 May 2018

issue

4

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29 May 2018

Creative Commons Attribution-NonCommercial 4.0 International

copyright license

start time

15 February 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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RNA degradation paths in a 12-subunit nuclear exosome complex

4 June 2018

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Saccharomyces cerevisiae Ski7 Is a GTP-Binding Protein Adopting the Characteristic Conformation of Active Translational GTPases

4 June 2018

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

4 June 2018

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The exosome complex establishes a barricade to erythroid maturation

4 June 2018

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The SKIV2L RNA exosome limits activation of the RIG-I-like receptors

4 June 2018

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Structure of an Rrp6–RNA exosome complex bound to poly(A) RNA

4 June 2018

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Identification of protein partners in mycobacteria using a single-step affinity purification method

4 June 2018

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ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers

4 June 2018

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The role of disordered protein regions in the assembly of decapping complexes and RNP granules

4 June 2018

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The yeast ski complex: crystal structure and RNA channeling to the exosome complex

4 June 2018

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Exonuclease hDIS3L2 specifies an exosome-independent 3'-5' degradation pathway of human cytoplasmic mRNA

4 June 2018

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The Hbs1-Dom34 protein complex functions in non-stop mRNA decay in mammalian cells

4 June 2018

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Alternative splicing and subfunctionalization generates functional diversity in fungal proteomes

4 June 2018

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The exoribonuclease Dis3L2 defines a novel eukaryotic RNA degradation pathway

4 June 2018

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The RNA exosome complex central channel controls both exonuclease and endonuclease Dis3 activities in vivo and in vitro

4 June 2018

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Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

RNA decay machines: the exosome

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

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4 June 2018

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Exo- and endoribonucleolytic activities of yeast cytoplasmic and nuclear RNA exosomes are dependent on the noncatalytic core and central channel.

4 June 2018

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Degradation of mRNAs that lack a stop codon: a decade of nonstop progress

4 June 2018

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SKIV2L mutations cause syndromic diarrhea, or trichohepatoenteric syndrome.

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

The eukaryotic RNA exosome: same scaffold but variable catalytic subunits

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

RNA channelling by the eukaryotic exosome

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Dis3-like 1: a novel exoribonuclease associated with the human exosome

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Features and development of Coot

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Mutations in TTC37 cause trichohepatoenteric syndrome (phenotypic diarrhea of infancy)

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Evolution of nonstop, no-go and nonsense-mediated mRNA decay and their termination factor-derived components

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Reconstitution, activities, and structure of the eukaryotic RNA exosome

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Apoptosis of canine mammary tumor cells induced by small interfering RNA (siRNA) against Bcl-xL gene

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Proteome survey reveals modularity of the yeast cell machinery

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

The human PAF complex coordinates transcription with events downstream of RNA synthesis

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Exosome-mediated recognition and degradation of mRNAs lacking a termination codon

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

An mRNA surveillance mechanism that eliminates transcripts lacking termination codons

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Ski7p G protein interacts with the exosome and the Ski complex for 3'-to-5' mRNA decay in yeast

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Function of the ski4p (Csl4p) and Ski7p proteins in 3'-to-5' degradation of mRNA

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

The ski7 antiviral protein is an EF1-alpha homolog that blocks expression of non-Poly(A) mRNA in Saccharomyces cerevisiae.

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

The exosome: a conserved eukaryotic RNA processing complex containing multiple 3'-->5' exoribonucleases

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Superkiller Mutations in Saccharomyces cerevisiae Suppress Exclusion of M2 Double-Stranded RNA by L-A-HN and Confer Cold Sensitivity in the Presence of M and L-A-HN

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Post-transcriptional spliceosomes are retained in nuclear speckles until splicing completion

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

Dom34:hbs1 plays a general role in quality-control systems by dissociation of a stalled ribosome at the 3' end of aberrant mRNA.

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5389692

13 August 2018

Identifiers

DOI

10.1093/NAR/GKW862

1 reference

29 May 2018

PMCID

5389692

1 reference

29 May 2018

PubMed ID

28204585

1 reference

29 May 2018