(Q55064805)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29531215%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

Capture Hi-C identifies putative target genes at 33 breast cancer risk loci (English)

1 reference

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20 March 2020

1

1 reference

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20 March 2020

Sarah L Maguire

4

1 reference

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20 March 2020

Vita Fedele

6

1 reference

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20 March 2020

Steven W Wingett

10

1 reference

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20 March 2020

Frank Dudbridge

16

1 reference

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20 March 2020

Olivia Fletcher

18

1 reference

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20 March 2020

author name string

Olivia C Leavy

2

1 reference

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20 March 2020

Nicola H Dryden

3

1 reference

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20 March 2020

Nikiana Simigdala

7

1 reference

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20 March 2020

Lesley-Ann Martin

8

1 reference

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20 March 2020

Simon Andrews

9

1 reference

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20 March 2020

Ioannis Assiotis

11

1 reference

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20 March 2020

Kerry Fenwick

12

1 reference

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20 March 2020

Ritika Chauhan

13

1 reference

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20 March 2020

Alistair G Rust

14

1 reference

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20 March 2020

Syed Haider

17

1 reference

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20 March 2020

Nichola Johnson

5

1 reference

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20 March 2020

Nick Orr

15

1 reference

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20 March 2020

language of work or name

English

0 references

publication date

12 March 2018

1 reference

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20 March 2020

published in

Nature Communications

1 reference

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20 March 2020

volume

9

1 reference

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20 March 2020

issue

1

1 reference

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20 March 2020

page(s)

1028

1 reference

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https://scigraph.springernature.com/pub.10.1038/s41467-018-03411-9

20 March 2020

exact match

0 references

cites work

Lineage-Specific Genome Architecture Links Enhancers and Non-coding Disease Variants to Target Gene Promoters

1 reference

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Evidence that the 5p12 Variant rs10941679 Confers Susceptibility to Estrogen-Receptor-Positive Breast Cancer through FGF10 and MRPS30 Regulation

18 June 2018

1 reference

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Functional mechanisms underlying pleiotropic risk alleles at the 19p13.1 breast-ovarian cancer susceptibility locus

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine scale mapping of the 17q22 breast cancer locus using dense SNPs, genotyped within the Collaborative Oncological Gene-Environment Study (COGs).

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine-Mapping of the 1p11.2 Breast Cancer Susceptibility Locus

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Identification of independent association signals and putative functional variants for breast cancer risk through fine-scale mapping of the 12p11 locus

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Landscape of somatic mutations in 560 breast cancer whole-genome sequences

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine-scale mapping of 8q24 locus identifies multiple independent risk variants for breast cancer

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Breast cancer risk variants at 6q25 display different phenotype associations and regulate ESR1, RMND1 and CCDC170.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

HiCUP: pipeline for mapping and processing Hi-C data

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine-scale mapping of the 4q24 locus identifies two independent loci associated with breast cancer risk

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Genome-wide association analysis of more than 120,000 individuals identifies 15 new susceptibility loci for breast cancer

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine-mapping identifies two additional breast cancer susceptibility loci at 9q31.2.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine-scale mapping of the 5q11.2 breast cancer locus reveals at least three independent risk variants regulating MAP3K1.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Evidence that breast cancer risk at the 2q35 locus is mediated through IGFBP5 regulation

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Expression QTL-based analyses reveal candidate causal genes and loci across five tumor types

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine-scale mapping of the FGFR2 breast cancer risk locus: putative functional variants differentially bind FOXA1 and E2F1.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Beyond GWASs: illuminating the dark road from association to function

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Topology of mammalian developmental enhancers and their regulatory landscapes

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Breast cancer statistics, 2013.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Functional variants at the 11q13 risk locus for breast cancer regulate cyclin D1 expression through long-range enhancers

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Genome-wide association studies identify four ER negative-specific breast cancer risk loci

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Multiple independent variants at the TERT locus are associated with telomere length and risks of breast and ovarian cancer

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Large-scale genotyping identifies 41 new loci associated with breast cancer risk

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Comprehensive molecular portraits of human breast tumours

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

The long-range interaction landscape of gene promoters

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

An integrated encyclopedia of DNA elements in the human genome

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Comparison of 6q25 breast cancer hits from Asian and European Genome Wide Association Studies in the Breast Cancer Association Consortium (BCAC)

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Hi-C: a comprehensive technique to capture the conformation of genomes

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

The role of genetic breast cancer susceptibility variants as prognostic factors

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Genome-wide association analysis identifies three new breast cancer susceptibility loci

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

A common variant at the TERT-CLPTM1L locus is associated with estrogen receptor-negative breast cancer

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Principles for the post-GWAS functional characterization of cancer risk loci

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Novel breast cancer susceptibility locus at 9q31.2: results of a genome-wide association study

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

A locus on 19p13 modifies risk of breast cancer in BRCA1 mutation carriers and is associated with hormone receptor-negative breast cancer in the general population

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Hi-C: a method to study the three-dimensional architecture of genomes

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Genome-wide association study identifies five new breast cancer susceptibility loci

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Fine scale mapping of the breast cancer 16q12 locus

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Newly discovered breast cancer susceptibility loci on 3p24 and 17q23.2.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Genome-wide association study identifies a new breast cancer susceptibility locus at 6q25.1.

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Common variants on chromosomes 2q35 and 16q12 confer susceptibility to estrogen receptor-positive breast cancer

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Genome-wide association study identifies novel breast cancer susceptibility loci

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Controlling the false discovery rate in behavior genetics research

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

18 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

Common variants on chromosome 5p12 confer susceptibility to estrogen receptor–positive breast cancer

13 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5847529

10.1038/S41467-018-03411-9

30 November 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29531215%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

20 March 2020

ADS bibcode

2018NatCo...9.1028B

0 references

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29531215%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

PubMed publication ID

29531215

1 reference