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iSEE: Interactive SummarizedExperiment Explorer.
scientific article published on 14 June 2018
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
title
iSEE: Interactive SummarizedExperiment Explorer
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
author
Federico Marini
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
Kévin Rue-Albrecht
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
Charlotte Soneson
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3
object named as
Charlotte Soneson
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
Aaron Lun
series ordinal
4
object named as
Aaron T L Lun
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
publication date
14 June 2018
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
published in
F1000Research
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
volume
7
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
page(s)
741
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
copyright license
Creative Commons Attribution 4.0 International
start time
14 June 2018
1 reference
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April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
describes a project that uses
ggplot2
object named as
ggplot2
1 reference
stated in
CZ Software Mentions: A large dataset of software mentions in the biomedical literature
cites work
HTSvis: a web app for exploratory data analysis and visualization of arrayed high-throughput screens.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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27 July 2018
Massively parallel digital transcriptional profiling of single cells
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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27 July 2018
Infrastructure for genomic interactions: Bioconductor classes for Hi-C, ChIA-PET and related experiments.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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27 July 2018
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
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PubMed Central
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27 July 2018
Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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27 July 2018
Bioconductor: open software development for computational biology and bioinformatics
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PubMed Central
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27 July 2018
Ensembl 2018.
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PubMed Central
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12 August 2018
Database Resources of the National Center for Biotechnology Information.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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12 August 2018
Alternative preprocessing of RNA-Sequencing data in The Cancer Genome Atlas leads to improved analysis results
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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12 August 2018
Orchestrating high-throughput genomic analysis with Bioconductor
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6013759
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12 August 2018
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
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12 August 2018
shinyMethyl: interactive quality control of Illumina 450k DNA methylation arrays in R.
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12 August 2018
OpenCyto: an open source infrastructure for scalable, robust, reproducible, and automated, end-to-end flow cytometry data analysis
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12 August 2018
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
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Mass-spectrometry-based spatial proteomics data analysis using pRoloc and pRolocdata.
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PubMed Central
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rintrojs: A Wrapper for the Intro.js Library
1 reference
stated in
COCI
retrieved
20 August 2022
reference URL
https://opencitations.net/index/coci/api/v1/citations/10.21105/JOSS.00063
Identifiers
DOI
10.12688/F1000RESEARCH.14966.1
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
PMC publication ID
6013759
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
PubMed publication ID
30002819
1 reference
stated in
Europe PubMed Central
PMC publication ID
6013759
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30002819%20AND%20SRC:MED&resulttype=core&format=json
retrieved
10 April 2020
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