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Using QIIME to analyze 16S rRNA gene sequences from microbial communities
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scholarly article
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title
Using QIIME to analyze 16S rRNA gene sequences from microbial communities
(English)
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author
Rob Knight
object named as
Rob Knight
series ordinal
6
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J Gregory Caporaso
series ordinal
5
object named as
J Gregory Caporaso
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Justin Kuczynski
series ordinal
1
object named as
Justin Kuczynski
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Jesse Stombaugh
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2
object named as
Jesse Stombaugh
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author name string
William Anton Walters
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3
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Antonio González
series ordinal
4
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language of work or name
English
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publication date
November 2012
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volume
Chapter 1
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page(s)
Unit 1E.5.
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cites work
New Generations: Sequencing Machines and Their Computational Challenges
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
Enterotypes of the human gut microbiome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
FastTree 2--approximately maximum-likelihood trees for large alignments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
PyNAST: a flexible tool for aligning sequences to a template alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
A large genome center's improvements to the Illumina sequencing system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4477843
retrieved
29 September 2018
Enterotypes of the human gut microbiome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2F9780471729259.MC01E05S27
retrieved
21 January 2018
Identifiers
DOI
10.1002/9780471729259.MC01E05S27
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PMCID
4477843
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PubMed ID
23184592
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