(Q56900882)

1

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Elena Kubareva

2

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Gudrun Stengel

3

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Peter Friedhoff

4

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Claus Urbanke

6

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Anna Sudina

7

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Alfred Pingoud

Journal of Biological Chemistry

8

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language of work or name

English

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publication date

19 April 2002

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published in

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volume

277

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issue

16

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page(s)

14306-14

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cites work

REBASE--restriction enzymes and methylases.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Restriction and modification systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Evidence for an evolutionary relationship among type-II restriction endonucleases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Identification of a PD-(D/E)XK-like domain with a novel configuration of the endonuclease active site in the methyl-directed restriction enzyme Mrr and its homologs

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Type II restriction endonucleases: structural, functional and evolutionary relationships

21 January 2018

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https://api.crossref.org/works/10.1074%2FJBC.M111625200

Structure and function of type II restriction endonucleases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Novel subtype of type IIs restriction enzymes. BfiI endonuclease exhibits similarities to the EDTA-resistant nuclease Nuc of Salmonella typhimurium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

SURVEY AND SUMMARY: holliday junction resolvases and related nucleases: identification of new families, phyletic distribution and evolutionary trajectories

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Polyphyletic evolution of type II restriction enzymes revisited: two independent sources of second-hand folds revealed

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Cleavage of synthetic substrates containing non-nucleotide inserts by restriction endonucleases. Change in the cleavage specificity of endonuclease SsoII

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

The interaction of DNA duplexes containing 2-aminopurine with restriction endonucleases EcoRII and SsoII.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Cross-linking of SsoII restriction endonuclease to cognate and non-cognate DNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Identification of a base-specific contact between the restriction endonuclease SsoII and its recognition sequence by photocross-linking

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Recognition and cleavage of DNA by type-II restriction endonucleases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Analysis of the nucleotide and derived amino acid sequences of the SsoII restriction endonuclease and methyltransferase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

The significance of distance and orientation of restriction endonuclease recognition sites in viral DNA genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Nucleotide sequence of the EcoRII restriction endonuclease gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

EcoRII can be activated to cleave refractory DNA recognition sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Oligonucleotide duplexes containing CC(A/T)GG stimulate cleavage of refractory DNA by restriction endonuclease EcoRII.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Activation of restriction endonuclease EcoRII does not depend on the cleavage of stimulator DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Mechanism of the interaction of EcoRII restriction endonuclease with two recognition sites. Probing of modified DNA duplexes as activators of the enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

DNA and spermidine provide a switch mechanism to regulate the activity of restriction enzyme Nae I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Nonidentical DNA-binding sites of endonuclease NaeI recognize different families of sequences flanking the recognition site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Structure of NaeI-DNA complex reveals dual-mode DNA recognition and complete dimer rearrangement

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Regions of endonuclease EcoRII involved in DNA target recognition identified by membrane-bound peptide repertoires.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Site-directed mutagenesis studies with EcoRV restriction endonuclease to identify regions involved in recognition and catalysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Crystal structure of Citrobacter freundii restriction endonuclease Cfr10I at 2.15 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Structure-based redesign of the catalytic/metal binding site of Cfr10I restriction endonuclease reveals importance of spatial rather than sequence conservation of active centre residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

An improved PCR-mutagenesis strategy for two-site mutagenesis or sequence swapping between related genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Pcons: a neural-network-based consensus predictor that improves fold recognition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

VERIFY3D: assessment of protein models with three-dimensional profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

The GROMOS Biomolecular Simulation Program Package

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Restriction endonuclease reactions requiring two recognition sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Use of specific oligonucleotide duplexes to stimulate cleavage of refractory DNA sites by restriction endonucleases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Molecular characterization of the restriction endonuclease gene (scrFIR) associated with the ScrFI restriction/modification system from Lactococcus lactis subsp. cremoris UC503.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Specific DNA recognition by EcoRV restriction endonuclease induced by calcium ions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

StyD4I restriction-modification system of Salmonella typhi D4: cloning and sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Imaging DNA loops induced by restriction endonuclease EcoRII. A single amino acid substitution uncouples target recognition from cooperative DNA interaction and cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Recognition sequence of a restriction enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

The Cfr10I restriction enzyme is functional as a tetramer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Structure prediction meta server

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

The Ecl18kI restriction-modification system: cloning, expression, properties of the purified enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

DNA cleavage at two recognition sites by the SfiI restriction endonuclease: salt dependence of cis and trans interactions between distant DNA sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Five-stranded beta-sheet sandwiched with two alpha-helices: a structural link between restriction endonucleases EcoRI and EcoRV

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200

Sau3AI, a monomeric type II restriction endonuclease that dimerizes on the DNA and thereby induces DNA loops

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111625200