(Q57055810)

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Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

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Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data (English)

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Marisol Sánchez-García

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Marisol Sánchez-García

8

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Kessy Abarenkov

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Kessy Abarenkov

15

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Johan Bengtsson-Palme

object named as

Johan Bengtsson-Palme

1

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Rolf Henrik Nilsson

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R. Henrik Nilsson

21

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Martin Hartmann

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Martin Hartmann

3

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Martin Unterseher

13

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Martin Unterseher

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2

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Martin Ryberg

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Yann Bertrand

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Anthony S. Amend

11

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Anthony S. Amend

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6

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Anna Godhe

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author name string

Sara Branco

4

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Zheng Wang

5

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Pierre De Wit

7

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Ingo Ebersberger

9

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Filipe de Sousa

10

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Ari Jumpponen

12

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Erik Kristiansson

14

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Kemal Sanli

17

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K. Martin Eriksson

18

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Unni Vik

19

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Vilmar Veldre

20

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publication date

July 2013

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Methods in Ecology and Evolution

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WikiProject Ecology

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5.8S-28S rRNA interaction and HMM-based ITS2 annotation

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The ITS2 Database III--sequences and structures for phylogeny

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Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants

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The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods

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An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

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10.1111/2041-210X.12073

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