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A novel in vitro assay reveals SNARE topology and the role of Ykt6 in autophagosome fusion with vacuoles
scientific article published on 10 August 2018
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Europe PubMed Central
PMC publication ID
6168247
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
title
A novel in vitro assay reveals SNARE topology and the role of Ykt6 in autophagosome fusion with vacuoles
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
main subject
cell biology
0 references
vacuole
1 reference
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inferred from title
author
Fulvio Reggiori
series ordinal
2
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Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
Christian Ungermann
series ordinal
3
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Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
author name string
Jieqiong Gao
series ordinal
1
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Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
language of work or name
English
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publication date
10 August 2018
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Europe PubMed Central
PMC publication ID
6168247
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
published in
Journal of Cell Biology
1 reference
stated in
Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
volume
217
1 reference
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Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
issue
10
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Europe PubMed Central
PMC publication ID
6168247
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
page(s)
3670-3682
1 reference
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Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
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The Dsl1 protein tethering complex is a resident endoplasmic reticulum complex, which interacts with five soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptors (SNAREs): implications for fusion and fusion regulation
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30 November 2018
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30 November 2018
HOPS initiates vacuole docking by tethering membranes before trans-SNARE complex assembly
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30 November 2018
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30 November 2018
Depalmitoylation of Ykt6 prevents its entry into the multivesicular body pathway
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30 November 2018
Global analysis of protein palmitoylation in yeast
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ATP-independent control of Vac8 palmitoylation by a SNARE subcomplex on yeast vacuoles.
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30 November 2018
The human SNARE protein Ykt6 mediates its own palmitoylation at C-terminal cysteine residues
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30 November 2018
Localization and activity of the SNARE Ykt6 determined by its regulatory domain and palmitoylation
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30 November 2018
Ykt6p is a multifunctional yeast R-SNARE that is required for multiple membrane transport pathways to the vacuole.
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30 November 2018
Mammalian ykt6 is a neuronal SNARE targeted to a specialized compartment by its profilin-like amino terminal domain
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30 November 2018
Cvt18/Gsa12 is required for cytoplasm-to-vacuole transport, pexophagy, and autophagy in Saccharomyces cerevisiae and Pichia pastoris
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Autophagy and the cytoplasm to vacuole targeting pathway both require Aut10p
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Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion
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30 November 2018
Genetic interactions with the yeast Q-SNARE VTI1 reveal novel functions for the R-SNARE YKT6.
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30 November 2018
Phox domain interaction with PtdIns(3)P targets the Vam7 t-SNARE to vacuole membranes.
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30 November 2018
The class C Vps complex functions at multiple stages of the vacuolar transport pathway
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30 November 2018
New component of the vacuolar class C-Vps complex couples nucleotide exchange on the Ypt7 GTPase to SNARE-dependent docking and fusion
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30 November 2018
Compartmental specificity of cellular membrane fusion encoded in SNARE proteins
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30 November 2018
A Ypt/Rab effector complex containing the Sec1 homolog Vps33p is required for homotypic vacuole fusion
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30 November 2018
Yeast Golgi SNARE interactions are promiscuous
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30 November 2018
Formation process of autophagosome is traced with Apg8/Aut7p in yeast
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30 November 2018
Three v-SNAREs and two t-SNAREs, present in a pentameric cis-SNARE complex on isolated vacuoles, are essential for homotypic fusion.
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30 November 2018
The Saccharomyces cerevisiae v-SNARE Vti1p is required for multiple membrane transport pathways to the vacuole
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
New constructs and strategies for efficient PCR-based gene manipulations in yeast.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
Acidic di-leucine motif essential for AP-3-dependent sorting and restriction of the functional specificity of the Vam3p vacuolar t-SNARE.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
Vam7p, a vacuolar SNAP-25 homolog, is required for SNARE complex integrity and vacuole docking and fusion
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
A vacuolar v-t-SNARE complex, the predominant form in vivo and on isolated vacuoles, is disassembled and activated for docking and fusion
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
A multispecificity syntaxin homologue, Vam3p, essential for autophagic and biosynthetic protein transport to the vacuole
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
Ykt6p, a Prenylated SNARE Essential for Endoplasmic Reticulum-Golgi Transport
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
The yeast v-SNARE Vti1p mediates two vesicle transport pathways through interactions with the t-SNAREs Sed5p and Pep12p
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
Ultrastructural analysis of the autophagic process in yeast: detection of autophagosomes and their characterization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
G-protein ligands inhibit in vitro reactions of vacuole inheritance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
Novel system for monitoring autophagy in the yeast Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6168247
retrieved
30 November 2018
The transmembrane domain of Vam3 affects the composition of cis- and trans-SNARE complexes to promote homotypic vacuole fusion
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/30097515
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Atg9 reservoirs, a new organelle of the yeast endomembrane system?
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/30097515
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Autophagosomal YKT6 is required for fusion with lysosomes independently of syntaxin 17.
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/30097515
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1083/JCB.201804039
1 reference
stated in
Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
PMC publication ID
6168247
1 reference
stated in
Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
PubMed publication ID
30097515
1 reference
stated in
Europe PubMed Central
PMC publication ID
6168247
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30097515%20AND%20SRC:MED&resulttype=core&format=json
retrieved
17 April 2020
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