(Q58374494)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25372310%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

title

DNA methylation: old dog, new tricks? (English)

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22 February 2020

1

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22 February 2020

Michiel Vermeulen

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25372310%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

author name string

Cornelia G Spruijt

series ordinal

1

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publication date

1 November 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25372310%20AND%20SRC:MED&resulttype=core&format=json

Nature Structural & Molecular Biology

22 February 2020

published in

1 reference

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22 February 2020

volume

21

1 reference

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22 February 2020

page(s)

949-954

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25372310%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

issue

11

1 reference

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https://scigraph.springernature.com/pub.10.1038/nsmb.2910

22 February 2020

exact match

0 references

cites work

Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

1 reference

Global epigenomic reconfiguration during mammalian brain development

21 January 2018

1 reference

Structure and function of mammalian DNA methyltransferases.

21 January 2018

1 reference

In vivo control of CpG and non-CpG DNA methylation by DNA methyltransferases

21 January 2018

1 reference

Cooperativity between DNA methyltransferases in the maintenance methylation of repetitive elements

21 January 2018

1 reference

CpG methylation of the cAMP-responsive enhancer/promoter sequence TGACGTCA abolishes specific factor binding as well as transcriptional activation

21 January 2018

1 reference

CpG methylation as a mechanism for the regulation of E2F activity

21 January 2018

1 reference

Methylation-sensitive sequence-specific DNA binding by the c-Myc basic region

21 January 2018

1 reference

Cross-talk between site-specific transcription factors and DNA methylation states

21 January 2018

1 reference

Methyl-CpG binding domain protein 2 represses transcription from hypermethylated pi-class glutathione S-transferase gene promoters in hepatocellular carcinoma cells

21 January 2018

1 reference

MBD3L1 and MBD3L2, two new proteins homologous to the methyl-CpG-binding proteins MBD2 and MBD3: characterization of MBD3L1 as a testis-specific transcriptional repressor

21 January 2018

1 reference

Methylation-dependent and -independent genomic targeting principles of the MBD protein family.

21 January 2018

1 reference

Molecular mechanisms of gene silencing mediated by DNA methylation

21 January 2018

1 reference

Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes

21 January 2018

1 reference

CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

21 January 2018

1 reference

KDM2B links the Polycomb Repressive Complex 1 (PRC1) to recognition of CpG islands.

21 January 2018

1 reference

Variant PRC1 complex-dependent H2A ubiquitylation drives PRC2 recruitment and polycomb domain formation.

21 January 2018

1 reference

DNA methylation directs a time-dependent repression of transcription initiation.

21 January 2018

1 reference

Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription

21 January 2018

1 reference

Biological functions of methyl-CpG-binding proteins

21 January 2018

1 reference

DNA methylation and methyl-CpG binding proteins: developmental requirements and function

21 January 2018

1 reference

A family of human zinc finger proteins that bind methylated DNA and repress transcription

21 January 2018

1 reference

The human proteins MBD5 and MBD6 associate with heterochromatin but they do not bind methylated DNA

21 January 2018

1 reference

Histone deacetylases associated with the mSin3 corepressor mediate mad transcriptional repression

21 January 2018

1 reference

Nuclear receptor repression mediated by a complex containing SMRT, mSin3A, and histone deacetylase

21 January 2018

1 reference

Rett syndrome mutations abolish the interaction of MeCP2 with the NCoR/SMRT co-repressor

21 January 2018

1 reference

MBD2/NuRD and MBD3/NuRD, two distinct complexes with different biochemical and functional properties.

21 January 2018

1 reference

Transcriptional repression of the transforming growth factor-beta type I receptor gene by DNA methylation results in the development of TGF-beta resistance in human gastric cancer

21 January 2018

1 reference

In vitro reactivation of the FMR1 gene involved in fragile X syndrome

21 January 2018

1 reference

DNMT1 is required to maintain CpG methylation and aberrant gene silencing in human cancer cells

21 January 2018

1 reference

A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein

21 January 2018

1 reference

Nucleosome-interacting proteins regulated by DNA and histone methylation

21 January 2018

1 reference

A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements

21 January 2018

1 reference

Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives.

21 January 2018

1 reference

Structural basis for Klf4 recognition of methylated DNA

21 January 2018

1 reference

Reprogramming somatic cells towards pluripotency by defined factors

21 January 2018

1 reference

An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence

21 January 2018

1 reference

CpG methylation of half-CRE sequences creates C/EBPalpha binding sites that activate some tissue-specific genes

21 January 2018

1 reference

Sequence-specific recognition of methylated DNA by human zinc-finger proteins

21 January 2018

1 reference

Hypomethylation of multiple imprinted loci in individuals with transient neonatal diabetes is associated with mutations in ZFP57

21 January 2018

1 reference

In embryonic stem cells, ZFP57/KAP1 recognize a methylated hexanucleotide to affect chromatin and DNA methylation of imprinting control regions

21 January 2018

1 reference

Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk

21 January 2018

1 reference

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

21 January 2018

1 reference

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

21 January 2018

1 reference

Quantification of the sixth DNA base hydroxymethylcytosine in the brain

21 January 2018

1 reference

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

21 January 2018

1 reference

Reversing DNA methylation: mechanisms, genomics, and biological functions

21 January 2018

1 reference

A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation

21 January 2018

1 reference

MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system.

21 January 2018

1 reference

Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation

21 January 2018

1 reference

Oxidative damage to methyl-CpG sequences inhibits the binding of the methyl-CpG binding domain (MBD) of methyl-CpG binding protein 2 (MeCP2).

21 January 2018

1 reference

Unusual characteristics of the DNA binding domain of epigenetic regulatory protein MeCP2 determine its binding specificity

21 January 2018

1 reference

Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells

21 January 2018

1 reference

Recognition of 5-hydroxymethylcytosine by the Uhrf1 SRA domain

21 January 2018

1 reference

Structural basis for hydroxymethylcytosine recognition by the SRA domain of UHRF2

21 January 2018

1 reference

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

21 January 2018

1 reference

Genome-wide profiling of 5-formylcytosine reveals its roles in epigenetic priming

21 January 2018

1 reference

Genome-wide profiling of DNA methylation in human cancer cells

21 January 2018

1 reference

Replication timing-related and gene body-specific methylation of active human genes.

21 January 2018

1 reference

Gene body-specific methylation on the active X chromosome

21 January 2018

1 reference

On the presence and role of human gene-body DNA methylation.

21 January 2018

1 reference

Conserved role of intragenic DNA methylation in regulating alternative promoters

21 January 2018

1 reference

Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal overrepresentation of ETS transcription factor binding sites

21 January 2018

1 reference

Epigenetic memory at embryonic enhancers identified in DNA methylation maps from adult mouse tissues

21 January 2018

1 reference

Charting a dynamic DNA methylation landscape of the human genome

21 January 2018

1 reference

Epigenomic analysis of multilineage differentiation of human embryonic stem cells

21 January 2018

1 reference

Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia.

21 January 2018

1 reference

The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells

21 January 2018

1 reference

Chromatin and transcription transitions of mammalian adult germline stem cells and spermatogenesis.

21 January 2018

1 reference

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

21 January 2018

1 reference

Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3 K4/K27 trimethylation

21 January 2018

1 reference

Genomic patterns and context specific interpretation of DNA methylation

21 January 2018

1 reference

Functions of DNA methylation: islands, start sites, gene bodies and beyond

21 January 2018

1 reference

Dependence of transcriptional repression on CpG methylation density

21 January 2018

1 reference

Phosphorylation of MeCP2 at Serine 80 regulates its chromatin association and neurological function.

21 January 2018

1 reference

Kaiso regulates Znf131-mediated transcriptional activation

21 January 2018

1 reference

Distinct DNA binding preferences for the c-Myc/Max and Max/Max dimers.

21 January 2018

1 reference

MBD2 is a transcriptional repressor belonging to the MeCP1 histone deacetylase complex

21 January 2018

1 reference

DNA methylation presents distinct binding sites for human transcription factors

31 March 2020

1 reference

Selective capture of 5-hydroxymethylcytosine from genomic DNA.

31 March 2020

1 reference

12 December 2020

Repression of genes by DNA methylation depends on CpG density and promoter strength: evidence for involvement of a methyl-CpG binding protein

1 reference

12 December 2020

Alternative splicing of MBD2 supports self-renewal in human pluripotent stem cells

1 reference

12 December 2020

Promoter hypermethylation of multiple genes in carcinoma of the uterine cervix

1 reference

12 December 2020

Identifiers

DOI

10.1038/NSMB.2910

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25372310%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference