(Q61444914)

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Fine mapping chromatin contacts in capture Hi-C data

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scholarly article

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Fine mapping chromatin contacts in capture Hi-C data (English)

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object named as

Chris Wallace

4

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author name string

Christiaan Q Eijsbouts

1

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Oliver S Burren

2

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Paul J Newcombe

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language of work or name

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publication date

23 January 2019

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20

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1

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77

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copyright license

Creative Commons Attribution 4.0 International

23 January 2019

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April 2022 Public Data File from Crossref

copyright status

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https://scigraph.springernature.com/pub.10.1186/s12864-018-5314-5

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Domain-wide regulation of gene expression in the human genome

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hi-C: a method to study the three-dimensional architecture of genomes

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

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BAYESIAN MODEL SEARCH AND MULTILEVEL INFERENCE FOR SNP ASSOCIATION STUDIES

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Topological domains in mammalian genomes identified by analysis of chromatin interactions

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhancer networks revealed by correlated DNAse hypersensitivity states of enhancers

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Large-scale chromatin organization: the good, the surprising, and the still perplexing

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C.

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Weibull regression with Bayesian variable selection to identify prognostic tumour markers of breast cancer survival

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Integrating functional data to prioritize causal variants in statistical fine-mapping studies

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Chromatin Interaction Analysis with Paired-End Tag (ChIA-PET) sequencing technology and application

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Multiplexed analysis of chromosome conformation at vastly improved sensitivity

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Capture Hi-C reveals novel candidate genes and complex long-range interactions with related autoimmune risk loci

1 reference

https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HiCUP: pipeline for mapping and processing Hi-C data

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Lineage-Specific Genome Architecture Links Enhancers and Non-coding Disease Variants to Target Gene Promoters

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Reconstruction of enhancer-target networks in 935 samples of human primary cells, tissues and cell lines

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https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

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Chromosome contacts in activated T cells identify autoimmune disease candidate genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Long-Range Enhancer Interactions Are Prevalent in Mouse Embryonic Stem Cells and Are Reorganized upon Pluripotent State Transition.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

peakC: a flexible, non-parametric peak calling package for 4C and Capture-C data

1 reference

https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis reveals no evidence of trans chromosomal regulation of mammalian immune development.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30674271

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/S12864-018-5314-5

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1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s12864-018-5314-5

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