(Q75377758)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14754230%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

title

Adsorption of monovalent and multivalent cations and anions on DNA molecules (English)

1 reference

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17 November 2019

2

1 reference

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17 November 2019

Gerhard Gompper

series ordinal

3

1 reference

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17 November 2019

author name string

Allahyarov E

series ordinal

1

1 reference

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17 November 2019

publication date

15 December 2003

1 reference

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17 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14754230%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

volume

68

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14754230%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

issue

6 Pt 1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14754230%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

page(s)

061903

1 reference

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The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides

17 November 2019

cites work

1 reference

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Osmotic properties of DNA: Critical evaluation of counterion condensation theory

21 January 2018

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The Potential of an Infinite Rod-Like Molecule and the Distribution of the Counter Ions

21 January 2018

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Counterion exchange reactions on DNA: Monte Carlo and Poisson-Boltzmann analysis

21 January 2018

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Helical coordinate system and electrostatic fields of double-helix charge distributions

21 January 2018

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Biomolecular electrostatics with the linearized Poisson-Boltzmann equation

21 January 2018

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A molecular simulation picture of DNA hydration around A- and B-DNA

21 January 2018

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Sodium and chlorine ions as part of the DNA solvation shell

21 January 2018

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Monte Carlo description of oligoelectrolyte properties of DNA oligomers: range of the end effect and the approach of molecular and thermodynamic properties to the polyelectrolyte limits

21 January 2018

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Grand canonical Monte Carlo molecular and thermodynamic predictions of ion effects on binding of an oligocation (L8+) to the center of DNA oligomers

21 January 2018

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Dielectric response of triplex DNA in ionic solution from simulations

21 January 2018

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Monte Carlo and Poisson-Boltzmann calculations of the fraction of counterions bound to DNA.

21 January 2018

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Modeling DNA in aqueous solutions: theoretical and computer simulation studies on the ion atmosphere of DNA.

21 January 2018

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Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn.

21 January 2018

1 reference

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Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA

21 January 2018

1 reference

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Effective interactions between electric double layers

21 January 2018

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Localisation and dynamics of sodium counterions around DNA in solution from molecular dynamics simulation

21 January 2018

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Competitive binding of Mg2+, Ca2+, Na+, and K+ ions to DNA in oriented DNA fibers: experimental and Monte Carlo simulation results

21 January 2018

1 reference

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Electrostatic interaction between helical macromolecules in dense aggregates: an impetus for DNA poly- and meso-morphism

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Structural basis of polyamine-DNA recognition: spermidine and spermine interactions with genomic B-DNAs of different GC content probed by Raman spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Structural effects of cobalt-amine compounds on DNA condensation

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Direct measurement of temperature-dependent solvation forces between DNA double helices

21 January 2018

1 reference

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Direct measurement of the intermolecular forces between counterion-condensed DNA double helices. Evidence for long range attractive hydration forces

21 January 2018

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21 January 2018

1 reference

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Spermine: an "invisible" component in the crystals of B-DNA. A grand canonical Monte Carlo and molecular dynamics simulation study

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

On the competition between water, sodium ions, and spermine in binding to DNA: a molecular dynamics computer simulation study

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Electronic properties, hydrogen bonding, stacking, and cation binding of DNA and RNA bases

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Raman spectroscopy of DNA-metal complexes. I. Interactions and conformational effects of the divalent cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd, and Cd

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

21 January 2018

1 reference

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Structure of a B-DNA dodecamer. III. Geometry of hydration

21 January 2018

1 reference

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Spermine-DNA interactions: a theoretical study

21 January 2018

1 reference

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Molecular mechanics of the interactions of spermine with DNA: DNA bending as a result of ligand binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Compact form of DNA induced by spermidine

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

DNA condensation with polyamines I. Spectroscopic studies

21 January 2018

1 reference

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Counterion-induced condensation of deoxyribonucleic acid. A light-scattering study

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Comparison of polyelectrolyte theories of the binding of cations to DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Monte Carlo determination of the distribution of ions about a cylindrical polyelectrolyte.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Effective interaction between helical biomolecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Localized interaction of the polyamine methylspermidine with double-helical DNA as monitored by 1H NMR self-diffusion measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

A 43Ca-NMR study of Ca(II)-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Locating monovalent cations in the grooves of B-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

DNA structure: cations in charge?

21 January 2018

1 reference

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Water and monovalent ions in the minor groove of B-DNA oligonucleotides as seen by NMR.

21 January 2018

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Sequence-specific binding of counterions to B-DNA.

21 January 2018

1 reference

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Water and Ions in a High Resolution Structure of B-DNA

21 January 2018

1 reference

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DNA structure: what's in charge?

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Hydration of the phosphate group in double-helical DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

The effect of a variable dielectric coefficient and finite ion size on Poisson-Boltzmann calculations of DNA-electrolyte systems

21 January 2018

1 reference

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The B-DNA dodecamer at high resolution reveals a spine of water on sodium

21 January 2018

1 reference

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Structure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Comparison of major groove hydration in isomorphous A-DNA octamers and dependence on base sequence and local helix geometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Hydration patterns and intermolecular interactions in A-DNA crystal structures. Implications for DNA recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

The electrostatic potential of B-DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Ions around DNA: Monte Carlo estimates of distribution with improved electrostatic potentials

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Structural information in the local electric field of dissolved B-DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Structure in the electric potential emanating from DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Overcharging of DNA in the Presence of Salt: Theory and Simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Overcharging in colloids: beyond the Poisson-Boltzmann approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Strong attraction between charged spheres due to metastable ionized states

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Screening of a macroion by multivalent ions: correlation-induced inversion of charge.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Macroions in salty water with multivalent ions: giant inversion of charge

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Colloquium: The physics of charge inversion in chemical and biological systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Influence of solvent granularity on the effective interaction between charged colloidal suspensions

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

X-ray diffraction study of DNA complexes with arginine peptides and their relation to nucleoprotamine structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Understanding salt or PEG induced attractive interactions to crystallize biological macromolecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Strong and specific effects of cations on lysozyme chloride solubility

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Electrostatic potential of B-DNA: effect of interionic correlations

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Binding of ionic ligands to polyelectrolytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Electrostatic mechanisms of DNA deformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

DNA persistence length revisited

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Persistence length of a strongly charged rodlike polyelectrolyte in the presence of salt

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Aggregation of melted DNA by divalent metal ion-mediated cross-linking

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Raman spectroscopy of DNA-metal complexes. II. The thermal denaturation of DNA in the presence of Sr2+, Ba2+, Mg2+, Ca2+, Mn2+, Co2+, Ni2+, and Cd2+.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Brownian dynamics simulation of DNA condensation

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Ionic effects on the elasticity of single DNA molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Complexes of semiflexible polyelectrolytes and charged spheres as models for salt-modulated nucleosomal structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Cation-induced toroidal condensation of DNA studies with Co3+(NH3)6

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

DNA condensation by multivalent cations

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Collapse of Stiff Polyelectrolytes due to Counterion Fluctuations

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Phase behavior of columnar DNA assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

On the calculation of electrostatic interactions in proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Distance-dependent dielectric constants and their application to double-helical DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Interactions and aggregation of apoferritin molecules in solution: effects of added electrolytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Effect of spatial inhomogeneity in dielectric permittivity on DNA double layer formation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Ion pair potentials-of-mean-force in water

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

Calculation of effective interaction potentials from radial distribution functions: A reverse Monte Carlo approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.68.061903

10.1103/PHYSREVE.68.061903

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14754230%20AND%20SRC:MED&resulttype=core&format=json

17 November 2019

0 references

0 references

1 reference