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Assaying DEAD-box RNA helicases and their role in mRNA degradation in Escherichia coli
scientific article published on 01 January 2008
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
title
Assaying DEAD-box RNA helicases and their role in mRNA degradation in Escherichia coli
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
main subject
Escherichia coli
object named as
Escherichia coli
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author
Agamemnon J Carpousis
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
author name string
Vanessa Khemici
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
Leonora Poljak
series ordinal
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
publication date
1 January 2008
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
published in
Methods in Enzymology
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
volume
447
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
page(s)
183-197
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
cites work
Studies of the RNA degradosome-organizing domain of the Escherichia coli ribonuclease RNase E.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Copurification of E. coli RNAase E and PNPase: evidence for a specific association between two enzymes important in RNA processing and degradation.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
mRNA degradation. A tale of poly(A) and multiprotein machines.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Helicase structure and mechanism
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Recognition and cooperation between the ATP-dependent RNA helicase RhlB and ribonuclease RNase E.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
CsdA, a cold-shock RNA helicase from Escherichia coli, is involved in the biogenesis of 50S ribosomal subunit
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coli.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An important role for RNase R in mRNA decay
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A method for the determination of inorganic phosphate in the presence of labile organic phosphate and high concentrations of protein: application to lens ATPases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Degradation of mRNA in Escherichia coli: an old problem with some new twists
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3' exonuclease and a DEAD-box RNA helicase
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
RNase E: still a wonderfully mysterious enzyme.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The DEAD-box protein family of RNA helicases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Messenger RNA stability and its role in control of gene expression in bacteria and phages
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Enzymatic synthesis of nucleic acidlike polynucleotides
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
DEAD-box RNA helicases in Escherichia coli
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The RNA degradosome and poly(A) polymerase of Escherichia coli are required in vivo for the degradation of small mRNA decay intermediates containing REP-stabilizers.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Evidence in vivo that the DEAD-box RNA helicase RhlB facilitates the degradation of ribosome-free mRNA by RNase E
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The RNase E of Escherichia coli has at least two binding sites for DEAD-box RNA helicases: functional replacement of RhlB by RhlE.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
mRNA decay in Escherichia coli comes of age.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Function in Escherichia coli of the non-catalytic part of RNase E: role in the degradation of ribosome-free mRNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dead-box proteins: a family affair--active and passive players in RNP-remodeling
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The RNA degradosome: life in the fast lane of adaptive molecular evolution.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Proteins associated with RNase E in a multicomponent ribonucleolytic complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Differential mRNA stability controls relative gene expression within a polycistronic operon
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A DEAD-box RNA helicase in the Escherichia coli RNA degradosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Running rings around RNA: a superfamily of phosphate-dependent RNases.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
DExD/H box RNA helicases: from generic motors to specific dissociation functions
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Stabilization of translationally active mRNA by prokaryotic REP sequences
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Allosteric activation of the ATPase activity of the Escherichia coli RhlB RNA helicase.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0076-6879%2808%2902210-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0076-6879(08)02210-6
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
PubMed publication ID
19161844
1 reference
stated in
Europe PubMed Central
PubMed publication ID
19161844
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19161844%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 January 2020
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