(Q84978540)

English

Predictive modeling of biomass component tradeoffs in Brassica napus developing oilseeds based on in silico manipulation of storage metabolism

scientific article published on 14 September 2012

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Predictive modeling of biomass component tradeoffs in Brassica napus developing oilseeds based on in silico manipulation of storage metabolism (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

object named as

Brassica napus

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

author name string

Jörg Schwender

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Jordan O Hay

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

publication date

14 September 2012

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Plant Physiology

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

160

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1218-1236

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

copyright license

Creative Commons Attribution 4.0 International

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Metabolic engineering of fatty acid biosynthesis in plants.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Flux balance analysis of barley seeds: a computational approach to study systemic properties of central metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increasing erucic acid content through combination of endogenous low polyunsaturated fatty acids alleles with Ld-LPAAT + Bn-fae1 transgenes in rapeseed (Brassica napus L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic network reconstruction of Chlamydomonas offers insight into light-driven algal metabolism.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic network analysis integrated with transcript verification for sequenced genomes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genome-scale metabolic model of Arabidopsis and some of its properties

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zero erucic acid trait of rapeseed (Brassica napus L.) results from a deletion of four base pairs in the fatty acid elongase 1 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of non-equilibrium glycolytic reactions in suspension-cultured plant cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conditional QTL mapping of oil content in rapeseed with respect to protein content and traits related to plant development and grain yield.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modification of seed oil content and acyl composition in the brassicaceae by expression of a yeast sn-2 acyltransferase gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

C4GEM, a genome-scale metabolic model to study C4 plant metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthesis of the major oil-body membrane protein in developing rapeseed (Brassica napus) embryos. Integration with storage-lipid and storage-protein synthesis and implications for the mechanism of oil-body formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genome-scale metabolic model accurately predicts fluxes in central carbon metabolism under stress conditions.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of differentially expressed genes in seeds of two near-isogenic Brassica napus lines with different oil content

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of Escherichia coli biomass composition on central metabolic fluxes predicted by a stoichiometric model

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Responses of metabolic systems to large changes in enzyme activities and effectors. 1. The linear treatment of unbranched chains.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physiological and developmental regulation of seed oil production.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of metabolic flux phenotypes for two Arabidopsis mutants with severe impairment in seed storage lipid synthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterizing the metabolic phenotype: a phenotype phase plane analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

OptForce: an optimization procedure for identifying all genetic manipulations leading to targeted overproductions

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of optimality in natural and perturbed metabolic networks

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oil and protein accumulation in developing seeds is influenced by the expression of a cytosolic pyrophosphatase in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic control analysis is helpful for informed genetic manipulation of oilseed rape (Brassica napus) to increase seed oil content

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning and functions analysis of a pyruvate dehydrogenase kinase in Brassica napus

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

wrinkled1: A novel, low-seed-oil mutant of Arabidopsis with a deficiency in the seed-specific regulation of carbohydrate metabolism.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical and physiological studies of Arabidopsis thaliana transgenic lines with repressed expression of the mitochondrial pyruvate dehydrogenase kinase

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast acetyl-CoA carboxylase activity is 2-oxoglutarate-regulated by interaction of PII with the biotin carboxyl carrier subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of the inorganic pyrophosphate in tissues of Pisum sativum L

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Flux-balance modeling of plant metabolism.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

METATOOL: for studying metabolic networks.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zea mays iRS1563: a comprehensive genome-scale metabolic reconstruction of maize metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A flux model of glycolysis and the oxidative pentosephosphate pathway in developing Brassica napus embryos

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mitochondrial metabolism in developing embryos of Brassica napus

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced seed oil production in canola by conditional expression of Brassica napus LEAFY COTYLEDON1 and LEC1-LIKE in developing seeds.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Response of plant metabolism to too little oxygen

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Storage reserve accumulation in Arabidopsis: metabolic and developmental control of seed filling

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Computational analysis of storage synthesis in developing Brassica napus L. (oilseed rape) embryos: flux variability analysis in relation to ¹³C metabolic flux analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolic network reconstruction and flux variability analysis of storage synthesis in developing oilseed rape (Brassica napus L.) embryos.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of antisense repression of an Arabidopsis thaliana pyruvate dehydrogenase kinase cDNA on plant development

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oils and fats as renewable raw materials in chemistry.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Contrapuntal networks of gene expression during Arabidopsis seed filling.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plants as factories for technical materials

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control analysis of lipid biosynthesis in tissue cultures from oil crops shows that flux control is shared between fatty acid synthesis and lipid assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Does anoxia tolerance involve altering the energy currency towards PPi?

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An in silico compartmentalized metabolic model of Brassica napus enables the systemic study of regulatory aspects of plant central metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-scale metabolic network modeling results in minimal interventions that cooperatively force carbon flux towards malonyl-CoA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increasing the flow of carbon into seed oil.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increasing seed mass and oil content in transgenic Arabidopsis by the overexpression of wri1-like gene from Brassica napus

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AlgaGEM--a genome-scale metabolic reconstruction of algae based on the Chlamydomonas reinhardtii genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Flux balance analysis of primary metabolism in Chlamydomonas reinhardtii

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A spatiotemporal analysis of enzymatic activities associated with carbon metabolism in wild-type and mutant embryos of Arabidopsis using in situ histochemistry.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant triacylglycerols as feedstocks for the production of biofuels.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reconstruction of Arabidopsis metabolic network models accounting for subcellular compartmentalization and tissue-specificity

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integration of metabolic databases for the reconstruction of genome-scale metabolic networks

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compositional changes in developing rape seed (Brassica napus L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Targeting of the Arabidopsis homomeric acetyl-coenzyme A carboxylase to plastids of rapeseeds

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increasing seed oil content in oil-seed rape (Brassica napus L.) by over-expression of a yeast glycerol-3-phosphate dehydrogenase under the control of a seed-specific promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stoichiometric model of Escherichia coli metabolism: incorporation of growth-rate dependent biomass composition and mechanistic energy requirements

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global analysis of gene expression profiles in Brassica napus developing seeds reveals a conserved lipid metabolism regulation with Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Restoring enzyme activity in nonfunctional low erucic acid Brassica napus fatty acid elongase 1 by a single amino acid substitution

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of pyruvate dehydrogenase complex activity in plant cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and functional analysis of cellular networks with CellNetAnalyzer

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/22984123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.112.203927

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22984123%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q84978540&oldid=2170404768"