(Q84991213)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

title

Systems biology update: cell type-specific transcriptional regulatory networks (English)

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13 February 2020

1 reference

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

author name string

Li Pu

series ordinal

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

publication date

4 December 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

number of pages

9

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inferred from page(s)

published in

Plant Physiology

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

volume

152

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

page(s)

411-419

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistil

13 February 2020

cites work

1 reference

12 December 2020

Reconstructing spatiotemporal gene expression data from partial observations

1 reference

12 December 2020

Cis-regulatory elements in plant cell signaling.

1 reference

12 December 2020

Establishment of a protein reference map for soybean root hair cells

1 reference

12 December 2020

A systems approach reveals regulatory circuitry for Arabidopsis trichome initiation by the GL3 and GL1 selectors

1 reference

12 December 2020

A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock

1 reference

12 December 2020

A new approach to decoding life: systems biology

1 reference

12 December 2020

Achieving the in silico plant. Systems biology and the future of plant biological research

1 reference

12 December 2020

A gene expression map of the Arabidopsis root

1 reference

12 December 2020

ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments

1 reference

12 December 2020

Cell type-specific expression profiling in plants via cell sorting of protoplasts from fluorescent reporter lines

1 reference

12 December 2020

Arabidopsis thaliana proteomics: from proteome to genome

1 reference

12 December 2020

Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis

1 reference

12 December 2020

A gene-centered C. elegans protein-DNA interaction network

1 reference

12 December 2020

Unraveling the dynamic transcriptome

1 reference

12 December 2020

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

1 reference

12 December 2020

Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems

1 reference

12 December 2020

Plant metabolomics: towards biological function and mechanism

1 reference

12 December 2020

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

1 reference

12 December 2020

Gene regulatory network models for plant development

1 reference

12 December 2020

Transcriptional profiling of the Arabidopsis embryo

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12 December 2020

Proteomics identification of differentially expressed proteins associated with pollen germination and tube growth reveals characteristics of germinated Oryza sativa pollen

1 reference

12 December 2020

Equivalent genetic regulatory networks in different contexts recover contrasting spatial cell patterns that resemble those in Arabidopsis root and leaf epidermis: a dynamic model

1 reference

12 December 2020

The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.

1 reference

12 December 2020

An evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants

1 reference

12 December 2020

Network motifs: theory and experimental approaches

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12 December 2020

Epigenetic inheritance in plants.

1 reference

12 December 2020

Transcription factor modularity in a gene-centered C. elegans core neuronal protein-DNA interaction network

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12 December 2020

Laser microdissection of narrow sheath mutant maize uncovers novel gene expression in the shoot apical meristem

1 reference

12 December 2020

Genome-wide profiling and analysis of Arabidopsis siRNAs

1 reference

12 December 2020

Functional analysis of the epidermal-specific MYB genes CAPRICE and WEREWOLF in Arabidopsis.

1 reference

12 December 2020

Biochemical and statistical network models for systems biology

1 reference

12 December 2020

Laser capture microdissection and cDNA microarrays used to generate gene expression profiles of the rapidly expanding fibre initial cells on the surface of cotton ovules

1 reference

12 December 2020

TRICHOMELESS1 regulates trichome patterning by suppressing GLABRA1 in Arabidopsis

1 reference

12 December 2020

Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).

1 reference

12 December 2020

A high-resolution root spatiotemporal map reveals dominant expression patterns.

1 reference

12 December 2020

Transcriptomic and proteomic analyses of pericycle cells of the maize primary root

1 reference

12 December 2020

Comparison of reverse-engineering methods using an in silico network

1 reference

12 December 2020

Network inference, analysis, and modeling in systems biology.

1 reference

12 December 2020

Cell-specific nitrogen responses mediate developmental plasticity

1 reference

12 December 2020

A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments

1 reference

12 December 2020

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

1 reference

12 December 2020

A genetic regulatory network in the development of trichomes and root hairs

1 reference

12 December 2020

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

1 reference

12 December 2020

Epigenome sequencing comes of age

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12 December 2020

The TTG1-bHLH-MYB complex controls trichome cell fate and patterning through direct targeting of regulatory loci

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12 December 2020

Cell identity mediates the response of Arabidopsis roots to abiotic stress.

1 reference

12 December 2020

Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics.

1 reference

12 December 2020

Widespread translational inhibition by plant miRNAs and siRNAs

1 reference

12 December 2020

An introduction to bioinformatics for glycomics research

1 reference

12 December 2020

A competitive complex formation mechanism underlies trichome patterning on Arabidopsis leaves

1 reference

12 December 2020

The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

1 reference

12 December 2020

A mutual support mechanism through intercellular movement of CAPRICE and GLABRA3 can pattern the Arabidopsis root epidermis

1 reference

12 December 2020

Systems approaches to identifying gene regulatory networks in plants.

1 reference

12 December 2020

Comparative transcriptomics of Arabidopsis sperm cells.

1 reference

12 December 2020

Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation

1 reference

12 December 2020

Interlinked nonlinear subnetworks underlie the formation of robust cellular patterns in Arabidopsis epidermis: a dynamic spatial model

1 reference

12 December 2020

A feedback mechanism controlling SCRAMBLED receptor accumulation and cell-type pattern in Arabidopsis

1 reference

12 December 2020

Discovery and revision of Arabidopsis genes by proteogenomics

1 reference

12 December 2020

MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays

1 reference

12 December 2020

Toward a systems-level understanding of developmental regulatory networks

1 reference

12 December 2020

A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies

1 reference

12 December 2020

Functional proteomics of Arabidopsis thaliana guard cells uncovers new stomatal signaling pathways

1 reference

12 December 2020

Functional genomics of root growth and development in Arabidopsis

1 reference

12 December 2020

Gene expression map of the Arabidopsis shoot apical meristem stem cell niche

1 reference

12 December 2020

The gene regulatory network for root epidermal cell-type pattern formation in Arabidopsis

1 reference

12 December 2020

Microdissection of shoot meristem functional domains

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.109.148668

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19965967%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference