(Q87113993)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

title

Transcriptome-wide target profiling of RNA cytosine methyltransferases using the mechanism-based enrichment procedure Aza-IP (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

author name string

Vahid Khoddami

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

Bradley R Cairns

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

publication date

16 January 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

page(s)

337-361

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24434802%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/nprot.2014.014

5 March 2020

exact match

0 references

cites work

MODOMICS: a database of RNA modification pathways--2013 update

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Post-transcriptional nucleotide modification and alternative folding of RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Non-coding RNAs in human disease

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Structure and function of long noncoding RNAs in epigenetic regulation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Detection of RNA modifications.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Identification of modified residues in RNAs by reverse transcription-based methods

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Transcriptome-wide mapping of 5-methylcytidine RNA modifications in bacteria, archaea, and yeast reveals m5C within archaeal mRNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Genome-wide characterization of methylguanosine-capped and polyadenylated small RNAs in the rice blast fungus Magnaporthe oryzae

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Identification of direct targets and modified bases of RNA cytosine methyltransferases

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

5-methylcytosine in RNA: detection, enzymatic formation and biological functions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

On the mechanism of inhibition of DNA-cytosine methyltransferases by cytosine analogs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Drug effects on nucleic acid modification. I. A specific effect of 5-azacytidine on mammalian transfer RNA methylation invivo

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Azacytidine inhibits RNA methylation at DNMT2 target sites in human cancer cell lines

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Decitabine--bedside to bench

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Mutations in NSUN2 cause autosomal-recessive intellectual disability.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Mutation in NSUN2, which encodes an RNA methyltransferase, causes autosomal-recessive intellectual disability

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Whole exome sequencing identifies a splicing mutation in NSUN2 as a cause of a Dubowitz-like syndrome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

The RNA methyltransferase Misu (NSun2) mediates Myc-induced proliferation and is upregulated in tumors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

The RNA-methyltransferase Misu (NSun2) poises epidermal stem cells to differentiate

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Pmt1, a Dnmt2 homolog in Schizosaccharomyces pombe, mediates tRNA methylation in response to nutrient signaling.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Dnmt2 functions in the cytoplasm to promote liver, brain, and retina development in zebrafish

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Cell cycle regulated expression of nucleolar antigen P120 in normal and transformed human fibroblasts

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Genomic gain of 5p15 leads to over-expression of Misu (NSUN2) in breast cancer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Frequent increased gene copy number and high protein expression of tRNA (cytosine-5-)-methyltransferase (NSUN2) in human cancers

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Genomic aberrations in lung adenocarcinoma in never smokers

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Characterization of two novel genes, WBSCR20 and WBSCR22, deleted in Williams-Beuren syndrome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Sperm motility defects and infertility in male mice with a mutation in Nsun7, a member of the Sun domain-containing family of putative RNA methyltransferases

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Human DNMT2 methylates tRNA(Asp) molecules using a DNA methyltransferase-like catalytic mechanism

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

RNA methyltransferases utilize two cysteine residues in the formation of 5-methylcytosine

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Yeast Nop2 and Rcm1 methylate C2870 and C2278 of the 25S rRNA, respectively

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

The nucleolar RNA methyltransferase Misu (NSun2) is required for mitotic spindle stability

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Expression of NOL1/NOP2/sun domain (Nsun) RNA methyltransferase family genes in early mouse embryogenesis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

The Sequence Alignment/Map format and SAMtools

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Integrative genomics viewer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

A stable system for the high-titer production of multiply attenuated lentiviral vectors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2014.014

Effects of 5-azacytidine on transfer RNA methyltransferases

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24434802