(Q89114917)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

title

GenomeTrakr proficiency testing for foodborne pathogen surveillance: an exercise from 2015 (English)

1 reference

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31 March 2020

8

1 reference

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31 March 2020

author name string

Ruth E Timme

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Hugh Rand

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Maria Sanchez Leon

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Maria Hoffmann

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Errol Strain

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Marc Allard

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Dwayne Roberson

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

publication date

15 June 2018

1 reference

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31 March 2020

1 reference

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31 March 2020

volume

4

1 reference

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31 March 2020

issue

7

1 reference

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PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States

31 March 2020

cites work

1 reference

12 December 2020

Gepard: a rapid and sensitive tool for creating dotplots on genome scale.

1 reference

12 December 2020

Identification of a salmonellosis outbreak by means of molecular sequencing.

1 reference

12 December 2020

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

1 reference

12 December 2020

Molecular genetic testing for fragile X syndrome: laboratory performance on the College of American Pathologists proficiency surveys (2001-2009).

1 reference

12 December 2020

High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach

1 reference

12 December 2020

Fast gapped-read alignment with Bowtie 2

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12 December 2020

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

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12 December 2020

QUAST: quality assessment tool for genome assemblies

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12 December 2020

Characterizing and measuring bias in sequence data

1 reference

12 December 2020

Results of the College of American Pathology/American College of Medical Genetics and Genomics external proficiency testing from 2006 to 2013 for three conditions prevalent in the Ashkenazi Jewish population

1 reference

12 December 2020

Molecular genetic testing for cystic fibrosis: laboratory performance on the College of American Pathologists external proficiency surveys

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12 December 2020

Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement

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12 December 2020

WGS Analysis and Interpretation in Clinical and Public Health Microbiology Laboratories: What Are the Requirements and How Do Existing Tools Compare?

1 reference

12 December 2020

Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars

1 reference

12 December 2020

Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities

1 reference

12 December 2020

Tracing Origins of the Salmonella Bareilly Strain Causing a Food-borne Outbreak in the United States.

1 reference

12 December 2020

The Listeria monocytogenes Core-Genome Sequence Typer (LmCGST): a bioinformatic pipeline for molecular characterization with next-generation sequence data

1 reference

12 December 2020

Making the Leap from Research Laboratory to Clinic: Challenges and Opportunities for Next-Generation Sequencing in Infectious Disease Diagnostics

1 reference

12 December 2020

Comparison of Sample Preparation Methods Used for the Next-Generation Sequencing of Mycobacterium tuberculosis

1 reference

12 December 2020

Complete Genome and Methylome Sequences of Salmonella enterica subsp. enterica Serovar Panama (ATCC 7378) and Salmonella enterica subsp. enterica Serovar Sloterdijk (ATCC 15791).

1 reference

12 December 2020

Practical Value of Food Pathogen Traceability through Building a Whole-Genome Sequencing Network and Database

1 reference

12 December 2020

The Challenges of Implementing Next Generation Sequencing Across a Large Healthcare System, and the Molecular Epidemiology and Antibiotic Susceptibilities of Carbapenemase-Producing Bacteria in the Healthcare System of the U.S. Department of Defense

1 reference

12 December 2020

Assuring the Quality of Next-Generation Sequencing in Clinical Microbiology and Public Health Laboratories

1 reference

12 December 2020

Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes

1 reference

12 December 2020

Whose sample is it anyway? Widespread misannotation of samples in transcriptomics studies

1 reference

12 December 2020

A Comparative Analysis of the Lyve-SET Phylogenomics Pipeline for Genomic Epidemiology of Foodborne Pathogens

1 reference

12 December 2020

Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory.

1 reference

12 December 2020

The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory.

1 reference

12 December 2020

PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance

1 reference

12 December 2020

CFSAN SNP Pipeline: an automated method for constructing SNP matrices from next-generation sequence data

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.7717/PEERJ-CS.20

25 March 2023

Identifiers

DOI

10.1099/MGEN.0.000185

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29906258%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

PubMed publication ID

29906258

1 reference