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Taxonomy and systematics of plant probiotic bacteria in the genomic era
scientific article published on 31 May 2017
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scholarly article
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Europe PubMed Central
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6604993
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24 April 2020
review article
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Europe PubMed Central
title
Taxonomy and systematics of plant probiotic bacteria in the genomic era
(English)
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Europe PubMed Central
PMCID
6604993
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31294168%20AND%20SRC:MED&resulttype=core&format=json
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24 April 2020
main subject
probiotics
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Lorena Carro
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Europe PubMed Central
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6604993
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24 April 2020
Imen Nouioui
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Imen Nouioui
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24 April 2020
publication date
31 May 2017
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24 April 2020
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AIMS Microbiology
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24 April 2020
volume
3
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24 April 2020
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3
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Europe PubMed Central
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24 April 2020
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383-412
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24 April 2020
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23 February 2021
Genome Sequence of Rhodococcus sp. 4J2A2, a Desiccation-Tolerant Bacterium Involved in Biodegradation of Aromatic Hydrocarbons.
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23 February 2021
The plant growth-promoting bacteria Azospirillum amazonense: genomic versatility and phytohormone pathway
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23 February 2021
Arachis hypogaea PGPR isolated from Argentine soil modifies its lipids components in response to temperature and salinity
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23 February 2021
Microbial communities on flower surfaces act as signatures of pollinator visitation.
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23 February 2021
A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey
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23 February 2021
Taxonomy of rhizobia and agrobacteria from the Rhizobiaceae family in light of genomics
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23 February 2021
Revised phylogeny of Rhizobiaceae: proposal of the delineation of Pararhizobium gen. nov., and 13 new species combinations
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23 February 2021
Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental spec
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23 February 2021
Microbial taxonomy in the post-genomic era: rebuilding from scratch?
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23 February 2021
Transcriptome analysis reveals dysregulation of innate immune response genes and neuronal activity-dependent genes in autism
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23 February 2021
Genotypic and phenotypic applications for the differentiation and species-level identification of achromobacter for clinical diagnoses.
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23 February 2021
Evaluation of seven housekeeping genes for multilocus sequence analysis of the genus Mesorhizobium: Resolving the taxonomic affiliation of the Cicer canariense rhizobia.
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23 February 2021
Genome features of the endophytic actinobacterium Micromonospora lupini strain Lupac 08: on the process of adaptation to an endophytic life style?
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23 February 2021
Rahnella victoriana sp. nov., Rahnella bruchi sp. nov., Rahnella woolbedingensis sp. nov., classification of Rahnella genomospecies 2 and 3 as Rahnella variigena sp. nov. and Rahnella inusitata sp. nov., respectively and emended description of the g
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23 February 2021
Analysis of genes contributing to plant-beneficial functions in Plant Growth-Promoting Rhizobacteria and related Proteobacteria
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23 February 2021
Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders 'Frankiales' and Micrococcales should be split into coherent entities: proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. n
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23 February 2021
Diversity and potential application of endophytic bacteria in ginger
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23 February 2021
Genome Sequence of Arthrobacter siccitolerans 4J27, a Xeroprotectant-Producing Desiccation-Tolerant Microorganism
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23 February 2021
Potential role of Flavobacterial gliding-motility and type IX secretion system complex in root colonization and plant defense
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23 February 2021
Expert consensus document. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic
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23 February 2021
Analysis of plant microbe interactions in the era of next generation sequencing technologies
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23 February 2021
The molecular marker-based comparison of Azotobacter spp. populations isolated from industrial soils of Cracow-Nowa Huta steelworks (southern Poland) and the adjacent agricultural soils.
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23 February 2021
Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of species of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis
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23 February 2021
Cytisus villosus from Northeastern Algeria is nodulated by genetically diverse Bradyrhizobium strains
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23 February 2021
Distribution of nontuberculous mycobacteria by multigene sequence-based typing and clinical significance of isolated strains
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23 February 2021
What stories can the Frankia genomes start to tell us?
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23 February 2021
Core and symbiotic genes reveal nine Mesorhizobium genospecies and three symbiotic lineages among the rhizobia nodulating Cicer canariense in its natural habitat (La Palma, Canary Islands).
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23 February 2021
The life history of Lactobacillus acidophilus as a probiotic: a tale of revisionary taxonomy, misidentification and commercial success
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23 February 2021
Diverse role of fast growing rhizobia in growth promotion and enhancement of psoralen content in Psoralea corylifolia L.
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23 February 2021
Plant growth-promoting potential of bacteria isolated from active volcano sites of Barren Island, India
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23 February 2021
Lupinus albus plants acquire mercury tolerance when inoculated with an Hg-resistant Bradyrhizobium strain.
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23 February 2021
Analytical tools and databases for metagenomics in the next-generation sequencing era
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23 February 2021
Comparative genomic analysis indicates that niche adaptation of terrestrial Flavobacteria is strongly linked to plant glycan metabolism
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23 February 2021
Complete Genome Sequence of Micromonospora Strain L5, a Potential Plant-Growth-Regulating Actinomycete, Originally Isolated from Casuarina equisetifolia Root Nodules
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23 February 2021
Genetic diversity of siderophore-producing bacteria of tobacco rhizosphere
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23 February 2021
Molecular characterization of nitrogen-fixing bacteria isolated from brazilian agricultural plants at São Paulo state
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23 February 2021
Microdiversity of deep-sea Bacillales isolated from Tyrrhenian sea sediments as revealed by ARISA, 16S rRNA gene sequencing and BOX-PCR fingerprinting
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23 February 2021
Phylogeny and classification of Dickeya based on multilocus sequence analysis
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23 February 2021
Biocontrol of Rhizoctonia solani damping-off and promotion of tomato plant growth by endophytic actinomycetes isolated from native plants of Algerian Sahara
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23 February 2021
Effects of the plant growth-promoting bacterium Burkholderia phytofirmans PsJN throughout the life cycle of Arabidopsis thaliana
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23 February 2021
Arthrobacter siccitolerans sp. nov., a highly desiccation-tolerant, xeroprotectant-producing strain isolated from dry soil
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23 February 2021
ACC deaminase and IAA producing growth promoting bacteria from the rhizosphere soil of tropical rice plants
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23 February 2021
Columnaris disease in fish: a review with emphasis on bacterium-host interactions
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23 February 2021
Genomics and proteomics in solving brain complexity
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23 February 2021
Comparison of 26 sphingomonad genomes reveals diverse environmental adaptations and biodegradative capabilities
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23 February 2021
Bacterial communities associated with the leaves and the roots of Arabidopsis thaliana.
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23 February 2021
Role of heavy metal resistant Ochrobactrum sp. and Bacillus spp. strains in bioremediation of a rice cultivar and their PGPR like activities
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23 February 2021
Unexpected diversity during community succession in the apple flower microbiome
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23 February 2021
The NRT2.5 and NRT2.6 genes are involved in growth promotion of Arabidopsis by the plant growth-promoting rhizobacterium (PGPR) strain Phyllobacterium brassicacearum STM196.
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23 February 2021
Genome sequence reveals that Pseudomonas fluorescens F113 possesses a large and diverse array of systems for rhizosphere function and host interaction
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23 February 2021
Plant secondary metabolite profiling evidences strain-dependent effect in the Azospirillum-Oryza sativa association
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23 February 2021
Defining bacterial species in the genomic era: insights from the genus Acinetobacter
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23 February 2021
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota.
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23 February 2021
Defining the core Arabidopsis thaliana root microbiome
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23 February 2021
Comparison of prominent Azospirillum strains in Azospirillum-Pseudomonas-Glomus consortia for promotion of maize growth
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23 February 2021
Genome sequence of the leaf-colonizing Bacterium Bacillus sp. strain 5B6, isolated from a cherry tree
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23 February 2021
Rhizobium promotes non-legumes growth and quality in several production steps: towards a biofertilization of edible raw vegetables healthy for humans
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23 February 2021
Genetic diversity among Curtobacterium flaccumfaciens pv. flaccumfaciens populations in the American high plains
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23 February 2021
The genome of plant growth-promoting Bacillus amyloliquefaciens subsp. plantarum strain YAU B9601-Y2 contains a gene cluster for mersacidin synthesis
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23 February 2021
Phylogeography of Lyme borreliosis-group spirochetes and methicillin-resistant Staphylococcus aureus
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23 February 2021
Plant-growth promoting effect of newly isolated rhizobacteria varies between two Arabidopsis ecotypes
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23 February 2021
The volatile-producing Flavobacterium johnsoniae strain GSE09 shows biocontrol activity against Phytophthora capsici in pepper
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23 February 2021
Multilocus genetics to reconstruct aeromonad evolution
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23 February 2021
Azospirillum improves lettuce growth and transplant under saline conditions
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23 February 2021
Molecular and phenotypic characterization of strains nodulating Anthyllis vulneraria in mine tailings, and proposal of Aminobacter anthyllidis sp. nov., the first definition of Aminobacter as legume-nodulating bacteria.
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23 February 2021
Diversity of Micromonospora strains isolated from nitrogen fixing nodules and rhizosphere of Pisum sativum analyzed by multilocus sequence analysis
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23 February 2021
Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments
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23 February 2021
Taxonomic evaluation of the Streptomyces hygroscopicus clade using multilocus sequence analysis and DNA-DNA hybridization, validating the MLSA scheme for systematics of the whole genus
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23 February 2021
Impact of PGPR inoculation on growth and antioxidant status of wheat under saline conditions
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23 February 2021
Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis
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23 February 2021
Genetic diversity of cultivable plant growth-promoting rhizobacteria in Korea
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23 February 2021
Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus
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23 February 2021
Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: a strategy for mitigating impacts of climate change
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23 February 2021
An MLSA-based online scheme for the rapid identification of Stenotrophomonas isolates
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23 February 2021
Phylogeny of members of the Frankia genus based on gyrB, nifH and glnII sequences.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Significant natural product biosynthetic potential of actinorhizal symbionts of the genus frankia, as revealed by comparative genomic and proteomic analyses.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Why plants need more than one type of auxin
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Characterization of root-nodulating bacteria associated to Prosopis farcta growing in the arid regions of Tunisia.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Assessment of root-associated paenibacillus polymyxa groups on growth promotion and induced systemic resistance in pepper.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Rapid method for isolation of desiccation-tolerant strains and xeroprotectants
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
The genus Micromonospora is widespread in legume root nodules: the example of Lupinus angustifolius
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
PseudoMLSA: a database for multigenic sequence analysis of Pseudomonas species.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
DNA sequence-based analysis of the Pseudomonas species
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Flavobacterium beibuense sp. nov., isolated from marine sediment
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23 February 2021
16S-23S rRNA intergenic spacer region variability in the genus Frankia
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Characterization of an endophytic bacterial community associated with Eucalyptus spp.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Bacillus siamensis sp. nov., isolated from salted crab (poo-khem) in Thailand
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Notes on the characterization of prokaryote strains for taxonomic purposes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Mesorhizobium shangrilense sp. nov., isolated from root nodules of Caragana species
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Multilocus sequence analysis of Brazilian Rhizobium microsymbionts of common bean (Phaseolus vulgaris L.) reveals unexpected taxonomic diversity
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Multilocus sequence analysis of the genus Bradyrhizobium
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Induced Systemic Resistance and Promotion of Plant Growth by Bacillus spp.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Interactions Between Strains of 2,4-Diacetylphloroglucinol-Producing Pseudomonas fluorescens in the Rhizosphere of Wheat.
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23 February 2021
Perspectives in biological nitrogen fixation research.
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23 February 2021
Diverse bacteria isolated from root nodules of wild Vicia species grown in temperate region of China
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23 February 2021
Flavobacterium lindanitolerans sp. nov., isolated from hexachlorocyclohexane-contaminated soil
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Genetic diversity of endophytic bacteria which could be find in the apoplastic sap of the medullary parenchym of the stem of healthy sugarcane plants.
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Advantages of multilocus sequence analysis for taxonomic studies: a case study using 10 housekeeping genes in the genus Ensifer (including former Sinorhizobium).
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Proposal of Viridibacillus gen. nov. and reclassification of Bacillus arvi, Bacillus arenosi and Bacillus neidei as Viridibacillus arvi gen. nov., comb. nov., Viridibacillus arenosi comb. nov. and Viridibacillus neidei comb. nov.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Diversity analysis of antagonists from rice-associated bacteria and their application in biocontrol of rice diseases.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Comparative transcriptome analysis reveals common and specific tags for root hair and crack-entry invasion in Sesbania rostrata.
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23 February 2021
Taxonomy of Lactobacilli and Bifidobacteria.
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23 February 2021
Assessment of the genetic diversity of Frankia microsymbionts of Elaeagnus angustifolia L. plants growing in a Tunisian date-palm oasis by analysis of PCR amplified nifD-K intergenic spacer
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23 February 2021
Discaria trinervis - Frankia symbiosis promotion by saprophytic actinomycetes
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
From phylogenetics to phylogenomics: the evolutionary relationships of insect endosymbiotic gamma-Proteobacteria as a test case.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Bacteria associated with orchid roots and microbial production of auxin.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Endobacteria in some ectomycorrhiza of Scots pine (Pinus sylvestris)
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Rapid Identification of Rhizobia by Restriction Fragment Length Polymorphism Analysis of PCR-Amplified 16S rRNA Genes.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Reassignment of enterobacter dissolvens to Enterobacter cloacae as E. cloacae subspecies dissolvens comb. nov. and emended description of Enterobacter asburiae and Enterobacter kobei.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Towards a prokaryotic genomic taxonomy
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Genomic insights that advance the species definition for prokaryotes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Genome phylogenetic analysis based on extended gene contents
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Assessing the phylogeny of Frankia-actinorhizal plant nitrogen-fixing root nodule symbioses with Frankia 16S rRNA and glutamine synthetase gene sequences
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Analysis of the endophytic actinobacterial population in the roots of wheat (Triticum aestivum L.) by terminal restriction fragment length polymorphism and sequencing of 16S rRNA clones.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Arthrobacter koreensis sp. nov., a novel alkalitolerant bacterium from soil
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Description of Devosia neptuniae sp. nov. that nodulates and fixes nitrogen in symbiosis with Neptunia natans, an aquatic legume from India
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Evolutionary implications of microbial genome tetranucleotide frequency biases
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Molecular characterization of a salt-tolerant bacterial community in the rice rhizosphere
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
A new species of Devosia that forms a unique nitrogen-fixing root-nodule symbiosis with the aquatic legume Neptunia natans (L.f.) druce
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Diversity of grass-associated Microbacteriaceae isolated from the phyllosphere and litter layer after mulching the sward; polyphasic characterization of Subtercola pratensis sp. nov., Curtobacterium herbarum sp. nov. and Plantibacter flavus [...]
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Using homolog groups to create a whole-genomic tree of free-living organisms: an update.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Isolation and characterization of Novosphingobium sp. strain MT1, a dominant polychlorophenol-degrading strain in a groundwater bioremediation system
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Use of whole genome sequence data to infer baculovirus phylogeny
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Nodulation of certain legumes of the genus Crotalaria by the new species Methylobacterium
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Taxonomy and important features of probiotic microorganisms in food and nutrition
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Molecular phylogenies of plants and Frankia support multiple origins of actinorhizal symbioses
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Whole genome-based phylogenetic analysis of free-living microorganisms
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Analysis of Frankia evolutionary radiation using glnII sequences
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Genome phylogeny based on gene content
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Compositional biases of bacterial genomes and evolutionary implications
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
[Infectivity and effectiveness of different strains of Frankia spp. on Atriplex cordobensis plants]
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Polyphasic taxonomy, a consensus approach to bacterial systematics
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Molecular phylogeny of the genus Frankia and related genera and emendation of the family Frankiaceae
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Characterization of the genes of the 2,3-butanediol operons from Klebsiella terrigena and Enterobacter aerogenes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Biology of Frankia strains, actinomycete symbionts of actinorhizal plants
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Regulation of the Bacillus subtilis alsS, alsD, and alsR genes involved in post-exponential-phase production of acetoin
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Reclassification of Micrococcus agilis (Ali-Cohen 1889) to the Genus Arthrobacter as Arthrobacter agilis comb. nov. and Emendation of the Genus Arthrobacter
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Probiotics in man and animals
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
DNA polymorphisms amplified by arbitrary primers are useful as genetic markers
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6604993
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23 February 2021
Identifiers
DOI
10.3934/MICROBIOL.2017.3.383
1 reference
stated in
Europe PubMed Central
PMCID
6604993
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31294168%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 April 2020
PMCID
6604993
1 reference
stated in
Europe PubMed Central
PMCID
6604993
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31294168%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 April 2020
PubMed ID
31294168
1 reference
stated in
Europe PubMed Central
PMCID
6604993
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31294168%20AND%20SRC:MED&resulttype=core&format=json
retrieved
24 April 2020
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