(Q92356915)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

title

The Kipoi repository accelerates community exchange and reuse of predictive models for genomics (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Lara Urban

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Anshul Kundaje

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Oliver Stegle

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

author name string

Roman Kreuzhuber

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Johnny Israeli

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Nancy Xu

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Jun Cheng

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Avanti Shrikumar

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Abhimanyu Banerjee

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Daniel S Kim

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Thorsten Beier

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

Julien Gagneur

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

publication date

1 June 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

volume

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

page(s)

592-600

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

FactorNet: A deep learning framework for predicting cell type specific transcription factor binding from nucleotide-resolution sequential data

29 April 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

A multi-task convolutional deep neural network for variant calling in single molecule sequencing

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

A universal SNP and small-indel variant caller using deep neural networks

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

A sequence-based, deep learning model accurately predicts RNA splicing branchpoints

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Bioconda: sustainable and comprehensive software distribution for the life sciences

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

DeepCRISPR: optimized CRISPR guide RNA design by deep learning.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Opportunities and obstacles for deep learning in biology and medicine.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Deep learning improves prediction of CRISPR-Cpf1 guide RNA activity.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Predicting the impact of non-coding variants on DNA methylation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Reproducibility of computational workflows is automated using continuous analysis

23 February 2021

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

23 February 2021

https://api.crossref.org/works/10.1038%2FS41587-019-0140-0

inferred from DOI database lookup

7 January 2021

based on heuristic

Dermatologist-level classification of skin cancer with deep neural networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

The Ensembl Variant Effect Predictor

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Learning the sequence determinants of alternative splicing from millions of random sequences

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Predicting effects of noncoding variants with deep learning-based sequence model

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Genome-wide discovery of human splicing branchpoints

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Enhanced regulatory sequence prediction using gapped k-mer features

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Bioconductor: open software development for computational biology and bioinformatics

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6777348

FactorNet: a deep learning framework for predicting cell type specific transcription factor binding from nucleotide-resolution sequential data

23 February 2021

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41587-019-0140-0

inferred from DOI database lookup

7 January 2021

based on heuristic

Universal Language Model Fine-tuning for Text Classification

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41587-019-0140-0

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41587-019-0140-0

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31138913%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

PubMed publication ID

31138913

1 reference