(Q93046804)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

title

The EMBL-EBI search and sequence analysis tools APIs in 2019 (English)

1 reference

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3 May 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Young Mi Park

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Joon Lee

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Nandana Madhusoodanan

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Simon C Potter

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Robert D. Finn

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Rodrigo López

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

author name string

Nicola Buso

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Tamer Gur

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Prasad Basutkar

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Adrian R N Tivey

8

1 reference

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3 May 2020

publication date

1 July 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

published in

Nucleic Acids Research

1 reference

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3 May 2020

volume

47

1 reference

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3 May 2020

issue

W1

1 reference

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3 May 2020

page(s)

W636-W641

1 reference

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Creative Commons Attribution 4.0 International

3 May 2020

copyright license

start time

12 April 2019

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Eleven quick tips to build a usable REST API for life sciences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

SIFTS: updated Structure Integration with Function, Taxonomy and Sequences resource allows 40-fold increase in coverage of structure-based annotations for proteins

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

InterPro in 2019: improving coverage, classification and access to protein sequence annotations

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Protein Data Bank: the single global archive for 3D macromolecular structure data

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

HMMER web server: 2018 update.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The European Nucleotide Archive in 2017.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Discovering and linking public omics data sets using the Omics Discovery Index.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The EBI search engine: EBI search as a service-making biological data accessible for all

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Programmatic access to bioinformatics tools from EMBL-EBI update: 2017

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The ChEMBL database in 2017

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The European Bioinformatics Institute in 2016: Data growth and integration

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Tools and data services registry: a community effort to document bioinformatics resources

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The IPD and IMGT/HLA database: allele variant databases

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Europe PMC: a full-text literature database for the life sciences and platform for innovation

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

PomBase 2015: updates to the fission yeast database

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

InterProScan 5: genome-scale protein function classification

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

NCBI's Database of Genotypes and Phenotypes: dbGaP.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Updates to BioSamples database at European Bioinformatics Institute

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

BLAST+: architecture and applications

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

The discovery, positioning and verification of a set of transcription-associated motifs in vertebrates

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

EMBOSS: the European Molecular Biology Open Software Suite

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Comparative analysis of noncoding regions of 77 orthologous mouse and human gene pairs

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

Improved tools for biological sequence comparison

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6602479

11 February 2021

Identifiers

DOI

10.1093/NAR/GKZ268

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30976793%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

1 reference