(Q104581373)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

title

Variation Patterns of NLR Clusters in <i>Arabidopsis thaliana</i> Genomes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

1 reference

Rachelle R Q Lee

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

Eunyoung Chae

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

publication date

24 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

volume

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

page(s)

100089

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

30 December 2020

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

NLR singletons, pairs, and networks: evolution, assembly, and regulation of the intracellular immunoreceptor circuitry of plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Basic local alignment search tool

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

A new eye on NLR proteins: focused on clarity or diffused by complexity?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Regulation and Evolution of NLR Genes: A Close Interconnection for Plant Immunity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Three genes of the Arabidopsis RPP1 complex resistance locus recognize distinct Peronospora parasitica avirulence determinants.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

BLAST+: architecture and applications

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Species-wide genetic incompatibility analysis identifies immune genes as hot spots of deleterious epistasis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Cooperation and Conflict in the Plant Immune System

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Evolution and Molecular Control of Hybrid Incompatibility in Plants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genome-Wide Architecture of Disease Resistance Genes in Lettuce

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Biopython: freely available Python tools for computational molecular biology and bioinformatics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The variant call format and VCFtools

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Plant pathogens and integrated defence responses to infection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Pivoting the plant immune system from dissection to deployment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The NumPy Array: A Structure for Efficient Numerical Computation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genetic Engineering for Disease Resistance in Plants: Recent Progress and Future Perspectives

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Out of Water: The Origin and Early Diversification of Plant -Genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Comparative analysis of targeted long read sequencing approaches for characterization of a plant's immune receptor repertoire.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Structurally distinct Arabidopsis thaliana NLR immune receptors recognize tandem WY domains of an oomycete effector

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Pervasive antagonistic interactions among hybrid incompatibility loci

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genomic and phenotypic differentiation of Arabidopsis thaliana along altitudinal gradients in the North Italian Alps

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Maintenance of genetic variation in plants and pathogens involves complex networks of gene-for-gene interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Stepwise artificial evolution of a plant disease resistance gene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The arms race is ancient history in Arabidopsis, the wildflower

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Sunflower pan-genome analysis shows that hybridization altered gene content and disease resistance

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Evolution and Conservation of Plant NLR Functions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Chromosome-level assemblies of multiple Arabidopsis genomes reveal hotspots of rearrangements with altered evolutionary dynamics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Defended to the Nines: 25 years of Resistance Gene Cloning Identifies Nine Mechanisms for R Protein Function.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Molecular genetics and evolution of disease resistance in cereals.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Multiple genetic processes result in heterogeneous rates of evolution within the major cluster disease resistance genes in lettuce

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genomic gene clustering analysis of pathways in eukaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The Sequence Alignment/Map format and SAMtools

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Allelic barley MLA immune receptors recognize sequence-unrelated avirulence effectors of the powdery mildew pathogen

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Modulation of R-gene expression across environments.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Population Genetics of the Highly Polymorphic RPP8 Gene Family

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The major resistance gene cluster in lettuce is highly duplicated and spans several megabases

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Database indexing for production MegaBLAST searches

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

RRS1 and RPS4 provide a dual Resistance-gene system against fungal and bacterial pathogens

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

TIR-only protein RBA1 recognizes a pathogen effector to regulate cell death in Arabidopsis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The Arabidopsis downy mildew resistance gene RPP5 shares similarity to the toll and interleukin-1 receptors with N and L6.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

An overview of genetic rust resistance: From broad to specific mechanisms.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

FastTree 2--approximately maximum-likelihood trees for large alignments

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

BEDTools: a flexible suite of utilities for comparing genomic features

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

The truncated NLR protein TIR-NBS13 is a MOS6/IMPORTIN-α3 interaction partner required for plant immunity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

An Ultra High-Density Arabidopsis thaliana Crossover Map That Refines the Influences of Structural Variation and Epigenetic Features

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Comparative analysis of plant immune receptor architectures uncovers host proteins likely targeted by pathogens

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Two linked pairs of Arabidopsis TNL resistance genes independently confer recognition of bacterial effector AvrRps4.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Diversity at the Mla powdery mildew resistance locus from cultivated barley reveals sites of positive selection.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Large-Scale Analyses of Angiosperm Nucleotide-Binding Site-Leucine-Rich Repeat Genes Reveal Three Anciently Diverged Classes with Distinct Evolutionary Patterns

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Genomic structural variation-mediated allelic suppression causes hybrid male sterility in rice.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Pooled Enrichment Sequencing Identifies Diversity and Evolutionary Pressures at NLR Resistance Genes within a Wild Tomato Population

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Subsets of NLR genes show differential signatures of adaptation during colonization of new habitats

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Fitness costs of R-gene-mediated resistance in Arabidopsis thaliana.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Activation of the Arabidopsis thaliana immune system by combinations of common ACD6 alleles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Activation of a Plant NLR Complex through Heteromeric Association with an Autoimmune Risk Variant of Another NLR.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Stronger When Together: Clustering of Plant NLR Disease resistance Genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Accelerated cloning of a potato late blight-resistance gene using RenSeq and SMRT sequencing.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Broad-spectrum mildew resistance in Arabidopsis thaliana mediated by RPW8.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

Inferring defense-related gene families in Arabidopsis and wheat.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

A truncated NLR protein, TIR-NBS2, is required for activated defense responses in the exo70B1 mutant

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.XPLC.2020.100089

10.1016/J.XPLC.2020.100089

7 January 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:33367252%20AND%20SRC:MED&resulttype=core&format=json

30 December 2020

1 reference