(Q89810205)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

title

Chromosome-level assemblies of multiple Arabidopsis genomes reveal hotspots of rearrangements with altered evolutionary dynamics (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

main subject

Evolutionary dynamics

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Korbinian Schneeberger

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

publication date

20 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

volume

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

page(s)

989

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

Sex speeds adaptation by altering the dynamics of molecular evolution.

8 April 2020

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Elimination of altered karyotypes by sexual reproduction preserves species identity

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax).

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

A widespread chromosomal inversion polymorphism contributes to a major life-history transition, local adaptation, and reproductive isolation

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Whole-genome sequencing of multiple Arabidopsis thaliana populations.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Reference-guided assembly of four diverse Arabidopsis thaliana genomes

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Simultaneous alignment of short reads against multiple genomes

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Patterns of population epigenomic diversity.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Chromosome-level assembly of Arabidopsis thaliana Ler reveals the extent of translocation and inversion polymorphisms

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Structural absorption by barbule microstructures of super black bird of paradise feathers.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Phased diploid genome assembly with single-molecule real-time sequencing.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Analysis of natural allelic variation in Arabidopsis using a multiparent recombinant inbred line population.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Bay-0 × Shahdara recombinant inbred line population: a powerful tool for the genetic dissection of complex traits in Arabidopsis

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

The recombination landscape in Arabidopsis thaliana F2 populations.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Genomic variation in 3,010 diverse accessions of Asian cultivated rice.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

The tomato pan-genome uncovers new genes and a rare allele regulating fruit flavor

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Mathematical model for studying genetic variation in terms of restriction endonucleases

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

The Arabidopsis downy mildew resistance gene RPP5 shares similarity to the toll and interleukin-1 receptors with N and L6.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Tandem and segmental gene duplication and recombination in the evolution of plant disease resistance gene

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

An Ultra High-Density Arabidopsis thaliana Crossover Map That Refines the Influences of Structural Variation and Epigenetic Features

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Massive crossover elevation via combination of HEI10 and recq4a recq4b during Arabidopsis meiosis.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Deleterious mutations and the evolution of sexual reproduction

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Hybrid necrosis: autoimmunity as a potential gene-flow barrier in plant species

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Species-wide genetic incompatibility analysis identifies immune genes as hot spots of deleterious epistasis

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Intragenic recombination and diversifying selection contribute to the evolution of downy mildew resistance at the RPP8 locus of Arabidopsis.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Three genes of the Arabidopsis RPP1 complex resistance locus recognize distinct Peronospora parasitica avirulence determinants.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

RPW8/HR repeats control NLR activation in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

EVOLUTION. Fruit flies diversify their offspring in response to parasite infection

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Plant pathogens and integrated defence responses to infection

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Gene duplication as a mechanism of genomic adaptation to a changing environment

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

The Sequence Alignment/Map format and SAMtools

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

MUMmer4: A fast and versatile genome alignment system.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Basic local alignment search tool

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Isolation of a higher eukaryotic telomere from Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Infernal 1.1: 100-fold faster RNA homology searches

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

A high-resolution map of Arabidopsis recombinant inbred lines by whole-genome exon array hybridization

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Gene prediction with a hidden Markov model and a new intron submodel

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Gene finding in novel genomes

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Automated generation of heuristics for biological sequence comparison

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

HISAT: a fast spliced aligner with low memory requirements

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Evaluation of time profile reconstruction from complex two-color microarray designs

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

RGAugury: a pipeline for genome-wide prediction of resistance gene analogs (RGAs) in plants

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

PopGenome: an efficient Swiss army knife for population genomic analyses in R

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes.

1 reference

https://api.crossref.org/works/10.1038%2FS41467-020-14779-Y

7 January 2021

Infertility treated with donor specific lymphocytes in recurrent idiopathic spontaneous abortion

1 reference

12 December 2020

The effects of amino acids on albumin synthesis by the isolated perfused rat liver

1 reference

12 December 2020

Broaden your mind, narrow your chances? Reflections on short-term medical work in the developing world

1 reference

12 December 2020

Scipio: using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species

1 reference

12 December 2020

Recombination Rate Heterogeneity within Arabidopsis Disease Resistance Genes

1 reference

12 December 2020

High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell.

1 reference

12 December 2020

10.1038/S41467-020-14779-Y

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32080174%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

1 reference