(Q107138386)

1

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Young-Suk Lee

2

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Yeon Choi

3

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Ahyeon Son

4

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Youngran Park

5

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Kyung-Min Lee

6

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Jeesoo Kim

7

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Jong-Seo Kim

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

8

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language of work or name

English

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publication date

27 April 2021

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published in

Molecular Cell

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cites work

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Internal initiation of translation from the human rhinovirus-2 internal ribosome entry site requires the binding of Unr to two distinct sites on the 5' untranslated region

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Interferon-stimulated poly(ADP-Ribose) polymerases are potent inhibitors of cellular translation and virus replication

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

IRAV (FLJ11286), an Interferon Stimulated Gene with Antiviral Activity Against Dengue Virus, Interacts with MOV10

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

SARS-CoV-2 Disrupts Splicing, Translation, and Protein Trafficking to Suppress Host Defenses

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Identification of a cis-acting dendritic targeting element in MAP2 mRNAs.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Proteomics of SARS-CoV-2-infected host cells reveals therapy targets

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Unr is required in vivo for efficient initiation of translation from the internal ribosome entry sites of both rhinovirus and poliovirus.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

In vitro reconstitution of SARS-coronavirus mRNA cap methylation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Structural Basis of Pathogenic Subgenomic Flavivirus RNA (sfRNA) Production

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Andromeda: a peptide search engine integrated into the MaxQuant environment

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Middle East respiratory syndrome coronavirus (MERS-CoV): announcement of the Coronavirus Study Group

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Pfam protein families database in 2019

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The nsp3 macrodomain promotes virulence in mice with coronavirus-induced encephalitis

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Human Coronavirus: Host-Pathogen Interaction

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Creating the gene ontology resource: design and implementation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

A census of human RNA-binding proteins

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Broad-Spectrum Antiviral Protein ZAP Restricts Human Retrotransposition

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The coronavirus macrodomain is required to prevent PARP-mediated inhibition of virus replication and enhancement of IFN expression.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

A new virus isolated from the human respiratory tract

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

A brave new world of RNA-binding proteins.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

LARP1 functions as a molecular switch for mTORC1-mediated translation of an essential class of mRNAs.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Rapamycin as a potential repurpose drug candidate for the treatment of COVID-19

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Mammalian TOR complex 2 controls the actin cytoskeleton and is rapamycin insensitive

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

mTOR inhibition in COVID-19: A commentary and review of efficacy in RNA viruses

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Positive selection and increased antiviral activity associated with the PARP-containing isoform of human zinc-finger antiviral protein

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Dynamic rewiring of the human interactome by interferon signaling

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Architecture of SARS-CoV-2 Transcriptome

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Identification of Coronavirus Isolated from a Patient in Korea with COVID-19

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Growth Factor Receptor Signaling Inhibition Prevents SARS-CoV-2 Replication

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The molecular biology of coronaviruses

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Comparative analysis of RNA genomes of mouse hepatitis viruses

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Fast gapped-read alignment with Bowtie 2

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Advances in CLIP Technologies for Studies of Protein-RNA Interactions

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Regulation Mechanisms of Viral IRES-Driven Translation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

PARP12 suppresses Zika virus infection through PARP-dependent degradation of NS1 and NS3 viral proteins

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Dengue subgenomic RNA binds TRIM25 to inhibit interferon expression for epidemiological fitness

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Reconstitution reveals the functional core of mammalian eIF3

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

RAP-MS: A Method to Identify Proteins that Interact Directly with a Specific RNA Molecule in Cells

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Severe Acute Respiratory Syndrome Coronavirus nsp9 Dimerization Is Essential for Efficient Viral Growth

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

β-Actin mRNA interactome mapping by proximity biotinylation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Severe acute respiratory syndrome coronavirus nsp1 suppresses host gene expression, including that of type I interferon, in infected cells

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

An RNA-centric dissection of host complexes controlling flavivirus infection

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Coronavirus as a possible cause of severe acute respiratory syndrome

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The PRIDE database and related tools and resources in 2019: improving support for quantification data

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Coronaviruses post-SARS: update on replication and pathogenesis

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Methods to study RNA-protein interactions

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Molecular biology: Rap and chirp about X inactivation.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Interplay between SARS-CoV-2 and the type I interferon response

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Do you know the sex of your cells?

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Fundamental properties of the mammalian innate immune system revealed by multispecies comparison of type I interferon responses.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

SARS-CoV replication and pathogenesis in an in vitro model of the human conducting airway epithelium

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Nonstructural Proteins Directing Coronavirus RNA Synthesis and Processing.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Continuous and Discontinuous RNA Synthesis in Coronaviruses

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

BioGRID: a general repository for interaction datasets

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The nsp9 replicase protein of SARS-coronavirus, structure and functional insights

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Characterization of RyDEN (C19orf66) as an Interferon-Stimulated Cellular Inhibitor against Dengue Virus Replication

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

CG dinucleotide suppression enables antiviral defence targeting non-self RNA.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Modulation of RNA Condensation by the DEAD-Box Protein eIF4A

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Proteomic analysis of cap-dependent translation identifies LARP1 as a key regulator of 5'TOP mRNA translation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

An Open Question: Is It Rational to Inhibit the mTor-Dependent Pathway as COVID-19 Therapy?

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The viral protein NSP1 acts as a ribosome gatekeeper for shutting down host translation and fostering SARS-CoV-2 translation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The Future of Cross-Linking and Immunoprecipitation (CLIP)

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

UniProt: a worldwide hub of protein knowledge

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

A large-scale binding and functional map of human RNA-binding proteins

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Regulation of HIV-1 Gag-Pol Expression by Shiftless, an Inhibitor of Programmed -1 Ribosomal Frameshifting

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Genome-wide CRISPR Screens Reveal Host Factors Critical for SARS-CoV-2 Infection

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

PARP12, an interferon-stimulated gene involved in the control of protein translation and inflammation.

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Discovery of seven novel Mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and betacoronavirus and avian coronaviruses

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

TRIM25 Is Required for the Antiviral Activity of Zinc Finger Antiviral Protein

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

A pneumonia outbreak associated with a new coronavirus of probable bat origin

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Zinc-finger antiviral protein inhibits HIV-1 infection by selectively targeting multiply spliced viral mRNAs for degradation

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Translational repression precedes and is required for ZAP-mediated mRNA decay

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

The SARS-CoV-2 RNA-protein interactome in infected human cells

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022

Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions

7 June 2021

1 reference

https://api.crossref.org/works/10.1016/j.molcel.2021.04.022