(Q21090668)

English

New rRNA gene-based phylogenies of the Alphaproteobacteria provide perspective on major groups, mitochondrial ancestry and phylogenetic instability

scientific article

New rRNA Gene-Based Phylogenies of the Alphaproteobacteria Provide Perspective on Major Groups, Mitochondrial Ancestry and Phylogenetic Instability

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scholarly article

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24349502%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

New rRNA gene-based phylogenies of the Alphaproteobacteria provide perspective on major groups, mitochondrial ancestry and phylogenetic instability (English)

1 reference

Europe PubMed Central

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3 March 2020

1 reference

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1 reference

based on heuristic

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Alphaproteobacteria

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1

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Matteo P Ferla

author given names

Matteo P

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Ferla

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Europe PubMed Central

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3 March 2020

4

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Wayne M Patrick

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Wayne M

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Patrick

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3 March 2020

J. Cameron Thrash

2

object named as

J Cameron Thrash

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J Cameron

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Thrash

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3 March 2020

author name string

Stephen J Giovannoni

3

author given names

Stephen J

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Giovannoni

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3 March 2020

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11 December 2013

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3 March 2020

1 reference

Europe PubMed Central

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3 March 2020

8

1 reference

Europe PubMed Central

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3 March 2020

12

1 reference

Europe PubMed Central

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3 March 2020

e83383

1 reference

Europe PubMed Central

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3 March 2020

copyright license

Creative Commons Attribution 4.0 International

11 December 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Bayesian phylogenetics with BEAUti and the BEAST 1.7

1 reference

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19 March 2017

The SAR11 group of alpha-proteobacteria is not related to the origin of mitochondria

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19 March 2017

Phylogenomic analysis of Odyssella thessalonicensis fortifies the common origin of Rickettsiales, Pelagibacter ubique and Reclimonas americana mitochondrion

1 reference

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19 March 2017

Long-branch attraction bias and inconsistency in Bayesian phylogenetics

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19 March 2017

Mapping the tree of life: progress and prospects

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19 March 2017

A robust species tree for the alphaproteobacteria

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859672

19 March 2017

A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

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19 March 2017

"Candidatus Midichloriaceae" fam. nov. (Rickettsiales), an ecologically widespread clade of intracellular alphaproteobacteria

1 reference

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19 March 2017

Streamlining and core genome conservation among highly divergent members of the SAR11 clade

1 reference

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19 March 2017

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade

1 reference

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19 March 2017

Independent genome reduction and phylogenetic reclassification of the oceanic SAR11 clade

1 reference

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19 March 2017

The hierarchical system of the 'Alphaproteobacteria': description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov

2 references

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19 March 2017

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6 April 2017

Archean Molecular Fossils and the Early Rise of Eukaryotes

1 reference

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19 March 2017

Phylogenomic Evidence for the Presence of a Flagellum and cbb3 Oxidase in the Free-Living Mitochondrial Ancestor

1 reference

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7 April 2017

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

1 reference

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7 April 2017

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859672

7 April 2017

CONSEL: for assessing the confidence of phylogenetic tree selection

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859672

7 April 2017

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859672

12 September 2017

Magnetococcus marinus gen. nov., sp. nov., a marine, magnetotactic bacterium that represents a novel lineage (Magnetococcaceae fam. nov., Magnetococcales ord. nov.) at the base of the Alphaproteobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3859672

12 September 2017

Bacterial biosynthesis and maturation of the didemnin anti-cancer agents.

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12 September 2017

A phylometagenomic exploration of oceanic alphaproteobacteria reveals mitochondrial relatives unrelated to the SAR11 clade

1 reference

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12 September 2017

The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell

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12 September 2017

Complete genome sequence of the chemolithoautotrophic marine magnetotactic coccus strain MC-1.

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12 September 2017

Kiloniella laminariae gen. nov., sp. nov., an alphaproteobacterium from the marine macroalga Laminaria saccharina

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12 September 2017

The prokaryotic tree of life: past, present... and future?

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12 September 2017

Sneathiella glossodoripedis sp. nov., a marine alphaproteobacterium isolated from the nudibranch Glossodoris cincta, and proposal of Sneathiellales ord. nov. and Sneathiellaceae fam. nov.

1 reference

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12 September 2017

Kordiimonas gwangyangensis gen. nov., sp. nov., a marine bacterium isolated from marine sediments that forms a distinct phyletic lineage (Kordiimonadales ord. nov.) in the 'Alphaproteobacteria'.

1 reference

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12 September 2017

Towards a genome-based taxonomy for prokaryotes

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12 September 2017

Archaeal phylogeny: reexamination of the phylogenetic position of Archaeoglobus fulgidus in light of certain composition-induced artifacts

1 reference

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12 September 2017

SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes.

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30 May 2018

The root of the mammalian tree inferred from whole mitochondrial genomes

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30 May 2018

Inferring ancient divergences requires genes with strong phylogenetic signals.

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21 January 2018

Phylogeny of eukaryotes based on ribosomal RNA: long-branch attraction and models of sequence evolution.

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21 January 2018

Isolation and characterization of a magnetotactic bacterial culture from the Mediterranean Sea.

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21 January 2018

Lesion bacterial communities in American lobsters with diet-induced shell disease

1 reference

https://pubmed.ncbi.nlm.nih.gov/24349502

12 December 2020

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Identifiers

10.1371/JOURNAL.PONE.0083383

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

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3 March 2020

2013PLoSO...883383F

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OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24349502%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

2 references

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24349502%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

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