(Q22065908)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

title

Bacillus subtilis and Escherichia coli essential genes and minimal cell factories after one decade of genome engineering (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

0 references

Bacillus subtilis

1 reference

Prof. Dr. Fabian M. Commichau

inferred from title

author

4

Fabian M Commichau

Fabian M

Commichau

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Mario Juhas

1

Mario

Juhas

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Daniel R Reuß

series ordinal

2

author given names

Daniel R

author last names

Reuß

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Bingyao Zhu

series ordinal

3

author given names

Bingyao

author last names

Zhu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

language of work or name

English

0 references

publication date

4 August 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

volume

160

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

page(s)

2341-2351

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

issue

Pt 11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

Combinatorial biosynthesis of carotenoids in a heterologous host: a powerful approach for the biosynthesis of novel structures.

12 March 2020

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7 January 2021

Moonlighting is mainstream: paradigm adjustment required

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Metabolic engineering of Escherichia coli for the production of 1,2-propanediol from glycerol.

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7 January 2021

Construction of long chromosomal deletion mutants of Escherichia coli and minimization of the genome.

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Biofuel production in Escherichia coli: the role of metabolic engineering and synthetic biology

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7 January 2021

Biosynthesis of polyhydroxyalkanoates containing 2-hydroxybutyrate from unrelated carbon source by metabolically engineered Escherichia coli.

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7 January 2021

Improvement of D-lactate productivity in recombinant Escherichia coli by coupling production with growth.

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7 January 2021

Metabolic engineering of Escherichia coli: a sustainable industrial platform for bio-based chemical production

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7 January 2021

Synthetic biology: tools to design microbes for the production of chemicals and fuels.

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7 January 2021

Update on designing and building minimal cells

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7 January 2021

Programmable bacterial catalysis - designing cells for biosynthesis of value-added compounds.

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7 January 2021

Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli.

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7 January 2021

In the fast lane: large-scale bacterial genome engineering.

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7 January 2021

Has nature already identified all useful antibacterial targets?

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7 January 2021

Essence of life: essential genes of minimal genomes

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7 January 2021

Essential genes as antimicrobial targets and cornerstones of synthetic biology

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7 January 2021

Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli

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7 January 2021

Transcriptome analysis guided metabolic engineering of Bacillus subtilis for riboflavin production.

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7 January 2021

Genetically switched D-lactate production in Escherichia coli.

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7 January 2021

Overexpression of a non-native deoxyxylulose-dependent vitamin B6 pathway in Bacillus subtilis for the production of pyridoxine.

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7 January 2021

Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study

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7 January 2021

Systematic genome reductions: theoretical and experimental approaches

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7 January 2021

Rapid and reliable DNA assembly via ligase cycling reaction

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7 January 2021

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

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7 January 2021

A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1.

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7 January 2021

The essential genome of a bacterium

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7 January 2021

Genome-scale engineering for systems and synthetic biology

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7 January 2021

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

1 reference

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7 January 2021

Construction of consecutive deletions of the Escherichia coli chromosome

1 reference

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7 January 2021

A synthetic DNA transplant

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing

1 reference

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7 January 2021

Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips

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7 January 2021

Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system

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7 January 2021

Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol

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7 January 2021

Harnessing homologous recombination in vitro to generate recombinant DNA via SLIC.

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7 January 2021

Enzymatic assembly of DNA molecules up to several hundred kilobases

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7 January 2021

Circular polymerase extension cloning for high-throughput cloning of complex and combinatorial DNA libraries

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7 January 2021

The art and design of genetic screens: RNA interference.

1 reference

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7 January 2021

The Bacillus subtilis endospore: assembly and functions of the multilayered coat.

1 reference

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7 January 2021

Cyclic di-AMP: another second messenger enters the fray

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7 January 2021

In silico metabolic engineering of Bacillus subtilis for improved production of riboflavin, Egl-237, (R,R)-2,3-butanediol and isobutanol

1 reference

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7 January 2021

Essential genes in Bacillus subtilis: a re-evaluation after ten years

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7 January 2021

Escherichia coli minimum genome factory

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7 January 2021

Bacillus minimum genome factory: effective utilization of microbial genome information

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7 January 2021

Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany

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7 January 2021

Essential Bacillus subtilis genes

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7 January 2021

RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media

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7 January 2021

Inhibitory cross-talk upon introduction of a new metabolic pathway into an existing metabolic network

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7 January 2021

Molecular basis of valine resistance in Escherichia coli K-12

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7 January 2021

Cyclic di-AMP homeostasis in bacillus subtilis: both lack and high level accumulation of the nucleotide are detrimental for cell growth

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7 January 2021

Thiol-disulfide oxidoreductases are essential for the production of the lantibiotic sublancin 168.

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7 January 2021

Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis

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7 January 2021

Superpositioning of deletions promotes growth of Escherichia coli with a reduced genome

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7 January 2021

Functional convergence in reduced genomes of bacterial symbionts spanning 200 My of evolution

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7 January 2021

Genome engineering reveals large dispensable regions in Bacillus subtilis.

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7 January 2021

Rapid and efficient construction of markerless deletions in the Escherichia coli genome

1 reference

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7 January 2021

SLiCE: a novel bacterial cell extract-based DNA cloning method

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7 January 2021

EcoliWiki: a wiki-based community resource for Escherichia coli

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7 January 2021

EcoCyc: fusing model organism databases with systems biology

1 reference

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7 January 2021

Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model.

1 reference

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7 January 2021

SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information

1 reference

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7 January 2021

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.

1 reference

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7 January 2021

Multiple rRNA operons are essential for efficient cell growth and sporulation as well as outgrowth in Bacillus subtilis.

1 reference

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7 January 2021

Functional analysis of 11 putative essential genes in Bacillus subtilis

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7 January 2021

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

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7 January 2021

Engineering a reduced Escherichia coli genome

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7 January 2021

Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective

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7 January 2021

Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome.

1 reference

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7 January 2021

A regulatory protein-protein interaction governs glutamate biosynthesis in Bacillus subtilis: the glutamate dehydrogenase RocG moonlights in controlling the transcription factor GltC

1 reference

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7 January 2021

Large-scale transposon mutagenesis of Mycoplasma pulmonis

1 reference

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7 January 2021

Small membrane proteins found by comparative genomics and ribosome binding site models.

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7 January 2021

Toward minimal bacterial cells: evolution vs. design

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7 January 2021

Emergent properties of reduced-genome Escherichia coli.

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7 January 2021

Genome transplantation in bacteria: changing one species to another

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7 January 2021

Creating bacterial strains from genomes that have been cloned and engineered in yeast

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7 January 2021

Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux

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7 January 2021

Creation of a bacterial cell controlled by a chemically synthesized genome

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7 January 2021

Isoprenoid pathway optimization for Taxol precursor overproduction in Escherichia coli

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7 January 2021

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis

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7 January 2021

Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism.

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7 January 2021

Synthetic biology: integrated gene circuits

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7 January 2021

Total synthesis of a functional designer eukaryotic chromosome.

1 reference

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7 January 2021

The complete genome sequence of Escherichia coli K-12

1 reference

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7 January 2021

Minimal Escherichia coli cell for the most efficient production of ethanol from hexoses and pentoses

1 reference

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7 January 2021

Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874.

1 reference

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7 January 2021

Bacillus subtilis mutants with knockouts of the genes encoding ribonucleases RNase Y and RNase J1 are viable, with major defects in cell morphology, sporulation, and competence

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates

1 reference

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7 January 2021

Small stress response proteins in Escherichia coli: proteins missed by classical proteomic studies

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Small RNAs and small proteins involved in resistance to cell envelope stress and acid shock in Escherichia coli: analysis of a bar-coded mutant collection

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Inactivation of the RluD pseudouridine synthase has minimal effects on growth and ribosome function in wild-type Escherichia coli and Salmonella enterica

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Inactivation of ribosomal protein genes in Bacillus subtilis reveals importance of each ribosomal protein for cell proliferation and cell differentiation

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

The Escherichia coli K-12 "wild types" W3110 and MG1655 have an rph frameshift mutation that leads to pyrimidine starvation due to low pyrE expression levels

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https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Experimental Determination and System Level Analysis of Essential Genes in Escherichia coli MG1655

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7 January 2021

Developments in the use of Bacillus species for industrial production

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7 January 2021

Local alignment tool based on Hadoop framework and GPU architecture

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7 January 2021

Improved production of secreted heterologous enzyme in Bacillus subtilis strain MGB874 via modification of glutamate metabolism and growth conditions

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Towards the development of Bacillus subtilis as a cell factory for membrane proteins and protein complexes

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Metabolic engineering of a reduced-genome strain of Escherichia coli for L-threonine production

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Patterns of evolutionary conservation of essential genes correlate with their compensability

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

The essential function of B. subtilis RNase III is to silence foreign toxin genes

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7 January 2021

Circular polymerase extension cloning of complex gene libraries and pathways

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7 January 2021

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

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7 January 2021

High confidence prediction of essential genes in Burkholderia cenocepacia

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7 January 2021

Selection-driven accumulation of suppressor mutants in bacillus subtilis: the apparent high mutation frequency of the cryptic gudB gene and the rapid clonal expansion of gudB(+) suppressors are due to growth under selection

1 reference

https://api.crossref.org/works/10.1099%2FMIC.0.079376-0

7 January 2021

Horizontal gene transfer in human pathogens

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7 January 2021

Infection strategies of enteric pathogenic Escherichia coli

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7 January 2021

Identifiers

DOI

10.1099/MIC.0.079376-0

2 references

Consolidated OpenCitations Corpus – April 2017

1253368

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json

release_zpjmbyu63jenrejcebrliboe7q

12 March 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zpjmbyu63jenrejcebrliboe7q

24 November 2022

mapped directly with Wikidata item

1253368

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

2 references

1253368

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25092907%20AND%20SRC:MED&resulttype=core&format=json